Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF1P27539 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.53■□□□□ 0.72
GDF1P27539 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF1P27539 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.53■□□□□ 0.72
GDF1P27539 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF1P27539 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF1P27539 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF1P27539 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
GDF1P27539 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.53■□□□□ 0.72
GDF1P27539 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.53■□□□□ 0.72
GDF1P27539 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.53■□□□□ 0.72
GDF1P27539 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
GDF1P27539 AL034346.1-201ENST00000568244 1277 ntBASIC19.53■□□□□ 0.72
GDF1P27539 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.53■□□□□ 0.72
GDF1P27539 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.53■□□□□ 0.72
GDF1P27539 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.53■□□□□ 0.72
GDF1P27539 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GDF1P27539 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF1P27539 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.53■□□□□ 0.72
GDF1P27539 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF1P27539 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF1P27539 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF1P27539 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF1P27539 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GDF1P27539 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.52■□□□□ 0.72
GDF1P27539 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GDF1P27539 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.52■□□□□ 0.72
GDF1P27539 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.52■□□□□ 0.72
GDF1P27539 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.52■□□□□ 0.72
GDF1P27539 AL137784.2-201ENST00000607332 1000 ntBASIC19.52■□□□□ 0.72
GDF1P27539 IKBKGP1-201ENST00000612193 1073 ntBASIC19.52■□□□□ 0.72
GDF1P27539 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF1P27539 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GDF1P27539 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.52■□□□□ 0.71
GDF1P27539 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
GDF1P27539 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.52■□□□□ 0.71
GDF1P27539 C1orf229-201ENST00000623686 2258 ntBASIC19.51■□□□□ 0.71
GDF1P27539 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.51■□□□□ 0.71
GDF1P27539 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.51■□□□□ 0.71
GDF1P27539 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GDF1P27539 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.51■□□□□ 0.71
GDF1P27539 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.51■□□□□ 0.71
GDF1P27539 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.51■□□□□ 0.71
GDF1P27539 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.51■□□□□ 0.71
GDF1P27539 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
GDF1P27539 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GDF1P27539 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF1P27539 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.5■□□□□ 0.71
GDF1P27539 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GDF1P27539 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.5■□□□□ 0.71
GDF1P27539 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.5■□□□□ 0.71
GDF1P27539 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.5■□□□□ 0.71
GDF1P27539 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.5■□□□□ 0.71
GDF1P27539 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.5■□□□□ 0.71
GDF1P27539 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.5■□□□□ 0.71
GDF1P27539 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.5■□□□□ 0.71
GDF1P27539 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GDF1P27539 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
GDF1P27539 AC004854.2-201ENST00000608450 1441 ntBASIC19.5■□□□□ 0.71
GDF1P27539 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 AC139530.1-201ENST00000575312 1977 ntBASIC19.5■□□□□ 0.71
GDF1P27539 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDF1P27539 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.5■□□□□ 0.71
GDF1P27539 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.5■□□□□ 0.71
GDF1P27539 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
GDF1P27539 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.49■□□□□ 0.71
GDF1P27539 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.49■□□□□ 0.71
GDF1P27539 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.49■□□□□ 0.71
GDF1P27539 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.49■□□□□ 0.71
GDF1P27539 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
GDF1P27539 ESRRAP2-201ENST00000418437 1549 ntBASIC19.49■□□□□ 0.71
GDF1P27539 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
GDF1P27539 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.49■□□□□ 0.71
GDF1P27539 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDF1P27539 AP004607.4-201ENST00000530158 1459 ntBASIC19.48■□□□□ 0.71
GDF1P27539 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDF1P27539 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDF1P27539 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDF1P27539 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms