Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN3P26045 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN3P26045 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.01■■□□□ 1.11
PTPN3P26045 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.01■■□□□ 1.11
PTPN3P26045 AC126544.1-201ENST00000580842 1059 ntBASIC22.01■■□□□ 1.11
PTPN3P26045 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.01■■□□□ 1.11
PTPN3P26045 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.01■■□□□ 1.11
PTPN3P26045 AC010542.4-201ENST00000563151 1910 ntBASIC22.01■■□□□ 1.11
PTPN3P26045 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN3P26045 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTPN3P26045 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 EDA-201ENST00000338901 1233 ntBASIC22■■□□□ 1.11
PTPN3P26045 AC099791.1-201ENST00000416440 715 ntBASIC22■■□□□ 1.11
PTPN3P26045 AP001330.3-201ENST00000520123 633 ntBASIC22■■□□□ 1.11
PTPN3P26045 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22■■□□□ 1.11
PTPN3P26045 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22■■□□□ 1.11
PTPN3P26045 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTPN3P26045 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.99■■□□□ 1.11
PTPN3P26045 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN3P26045 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN3P26045 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN3P26045 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTPN3P26045 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.99■■□□□ 1.11
PTPN3P26045 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.99■■□□□ 1.11
PTPN3P26045 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.98■■□□□ 1.11
PTPN3P26045 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN3P26045 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.98■■□□□ 1.11
PTPN3P26045 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.98■■□□□ 1.11
PTPN3P26045 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.98■■□□□ 1.11
PTPN3P26045 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN3P26045 AC027682.1-201ENST00000562846 899 ntBASIC21.98■■□□□ 1.11
PTPN3P26045 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.98■■□□□ 1.11
PTPN3P26045 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.98■■□□□ 1.11
PTPN3P26045 AL031432.3-201ENST00000607698 485 ntBASIC21.98■■□□□ 1.11
PTPN3P26045 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PTPN3P26045 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN3P26045 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN3P26045 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PTPN3P26045 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTPN3P26045 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.98■■□□□ 1.11
PTPN3P26045 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.97■■□□□ 1.11
PTPN3P26045 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.97■■□□□ 1.11
PTPN3P26045 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.97■■□□□ 1.11
PTPN3P26045 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PTPN3P26045 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 IGHV3-19-201ENST00000521488 291 ntBASIC21.97■■□□□ 1.11
PTPN3P26045 AL355001.2-201ENST00000620617 1191 ntBASIC21.97■■□□□ 1.11
PTPN3P26045 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTPN3P26045 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.97■■□□□ 1.11
PTPN3P26045 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.96■■□□□ 1.11
PTPN3P26045 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN3P26045 AC026471.6-201ENST00000622954 1905 ntBASIC21.96■■□□□ 1.11
PTPN3P26045 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN3P26045 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN3P26045 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN3P26045 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN3P26045 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.96■■□□□ 1.11
PTPN3P26045 AF213884.3-201ENST00000563833 479 ntBASIC21.96■■□□□ 1.11
PTPN3P26045 AL139246.5-201ENST00000606645 996 ntBASIC21.96■■□□□ 1.11
PTPN3P26045 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.96■■□□□ 1.11
PTPN3P26045 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN3P26045 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PTPN3P26045 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.95■■□□□ 1.1
PTPN3P26045 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.95■■□□□ 1.1
PTPN3P26045 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.95■■□□□ 1.1
PTPN3P26045 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 MIR939-201ENST00000401314 82 ntBASIC21.95■■□□□ 1.1
PTPN3P26045 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PTPN3P26045 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PTPN3P26045 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN3P26045 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN3P26045 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
PTPN3P26045 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN3P26045 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN3P26045 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.94■■□□□ 1.1
PTPN3P26045 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms