Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCL1P22362 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCL1P22362 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.59■□□□□ 0.57
CCL1P22362 SYT6-210ENST00000641643 1587 ntBASIC18.59■□□□□ 0.57
CCL1P22362 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.59■□□□□ 0.57
CCL1P22362 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL1P22362 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.59■□□□□ 0.57
CCL1P22362 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.58■□□□□ 0.57
CCL1P22362 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CCL1P22362 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CCL1P22362 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.58■□□□□ 0.57
CCL1P22362 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
CCL1P22362 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL1P22362 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.58■□□□□ 0.56
CCL1P22362 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL1P22362 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.58■□□□□ 0.56
CCL1P22362 AC104564.3-201ENST00000582367 638 ntBASIC18.58■□□□□ 0.56
CCL1P22362 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.58■□□□□ 0.56
CCL1P22362 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL1P22362 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
CCL1P22362 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL1P22362 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCL1P22362 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.57■□□□□ 0.56
CCL1P22362 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 AP005435.1-201ENST00000529293 1178 ntBASIC18.57■□□□□ 0.56
CCL1P22362 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.57■□□□□ 0.56
CCL1P22362 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCL1P22362 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL1P22362 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL1P22362 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL1P22362 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL1P22362 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL1P22362 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL1P22362 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.56■□□□□ 0.56
CCL1P22362 AL034346.1-201ENST00000568244 1277 ntBASIC18.56■□□□□ 0.56
CCL1P22362 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCL1P22362 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL1P22362 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL1P22362 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.55■□□□□ 0.56
CCL1P22362 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL1P22362 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL1P22362 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL1P22362 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL1P22362 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL1P22362 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.54■□□□□ 0.56
CCL1P22362 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCL1P22362 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.54■□□□□ 0.56
CCL1P22362 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL1P22362 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.54■□□□□ 0.56
CCL1P22362 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL1P22362 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCL1P22362 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL1P22362 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL1P22362 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL1P22362 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL1P22362 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCL1P22362 SLC47A1P1-202ENST00000449666 945 ntBASIC18.53■□□□□ 0.56
CCL1P22362 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.53■□□□□ 0.56
CCL1P22362 AC131281.2-201ENST00000520478 145 ntBASIC18.53■□□□□ 0.56
CCL1P22362 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.53■□□□□ 0.56
CCL1P22362 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCL1P22362 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CCL1P22362 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms