Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.8■□□□□ 0.76
RPS4Y1P22090 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y1P22090 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y1P22090 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPS4Y1P22090 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS4Y1P22090 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RPS4Y1P22090 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS4Y1P22090 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.79■□□□□ 0.76
RPS4Y1P22090 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.79■□□□□ 0.76
RPS4Y1P22090 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
RPS4Y1P22090 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y1P22090 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 AL034346.1-201ENST00000568244 1277 ntBASIC19.78■□□□□ 0.76
RPS4Y1P22090 AC233992.3-201ENST00000607491 485 ntBASIC19.78■□□□□ 0.76
RPS4Y1P22090 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y1P22090 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.78■□□□□ 0.76
RPS4Y1P22090 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RPS4Y1P22090 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y1P22090 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y1P22090 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y1P22090 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.77■□□□□ 0.76
RPS4Y1P22090 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.77■□□□□ 0.76
RPS4Y1P22090 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS4Y1P22090 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y1P22090 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.77■□□□□ 0.76
RPS4Y1P22090 AC008406.3-201ENST00000620001 1374 ntBASIC19.77■□□□□ 0.76
RPS4Y1P22090 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y1P22090 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS4Y1P22090 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPS4Y1P22090 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.77■□□□□ 0.75
RPS4Y1P22090 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
RPS4Y1P22090 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.76■□□□□ 0.75
RPS4Y1P22090 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.76■□□□□ 0.75
RPS4Y1P22090 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.76■□□□□ 0.75
RPS4Y1P22090 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPS4Y1P22090 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPS4Y1P22090 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y1P22090 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.75■□□□□ 0.75
RPS4Y1P22090 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.75■□□□□ 0.75
RPS4Y1P22090 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.75■□□□□ 0.75
RPS4Y1P22090 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y1P22090 AC026310.3-201ENST00000625186 2373 ntBASIC19.75■□□□□ 0.75
RPS4Y1P22090 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y1P22090 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y1P22090 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y1P22090 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y1P22090 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 AC096631.2-201ENST00000436136 790 ntBASIC19.74■□□□□ 0.75
RPS4Y1P22090 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS4Y1P22090 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y1P22090 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms