Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHBP21953 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.47■■□□□ 1.03
BCKDHBP21953 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHBP21953 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
BCKDHBP21953 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
BCKDHBP21953 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
BCKDHBP21953 AC073210.2-201ENST00000430369 194 ntBASIC21.46■■□□□ 1.03
BCKDHBP21953 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.46■■□□□ 1.03
BCKDHBP21953 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
BCKDHBP21953 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BCKDHBP21953 AC008687.6-201ENST00000596318 630 ntBASIC21.46■■□□□ 1.03
BCKDHBP21953 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BCKDHBP21953 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.46■■□□□ 1.03
BCKDHBP21953 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
BCKDHBP21953 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BCKDHBP21953 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
BCKDHBP21953 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
BCKDHBP21953 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BCKDHBP21953 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
BCKDHBP21953 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.45■■□□□ 1.02
BCKDHBP21953 AC138907.5-202ENST00000569484 235 ntBASIC21.45■■□□□ 1.02
BCKDHBP21953 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
BCKDHBP21953 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.45■■□□□ 1.02
BCKDHBP21953 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHBP21953 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.44■■□□□ 1.02
BCKDHBP21953 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.44■■□□□ 1.02
BCKDHBP21953 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.44■■□□□ 1.02
BCKDHBP21953 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHBP21953 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHBP21953 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHBP21953 AC093827.2-201ENST00000512654 315 ntBASIC21.43■■□□□ 1.02
BCKDHBP21953 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.43■■□□□ 1.02
BCKDHBP21953 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
BCKDHBP21953 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHBP21953 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHBP21953 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
BCKDHBP21953 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHBP21953 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHBP21953 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.43■■□□□ 1.02
BCKDHBP21953 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHBP21953 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHBP21953 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.42■■□□□ 1.02
BCKDHBP21953 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.42■■□□□ 1.02
BCKDHBP21953 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.42■■□□□ 1.02
BCKDHBP21953 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
BCKDHBP21953 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHBP21953 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHBP21953 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.42■■□□□ 1.02
BCKDHBP21953 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.41■■□□□ 1.02
BCKDHBP21953 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 CYP2T1P-201ENST00000432607 1285 ntBASIC21.41■■□□□ 1.02
BCKDHBP21953 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
BCKDHBP21953 AC079089.2-201ENST00000531211 1277 ntBASIC21.41■■□□□ 1.02
BCKDHBP21953 KRT18P20-201ENST00000548986 1279 ntBASIC21.41■■□□□ 1.02
BCKDHBP21953 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.41■■□□□ 1.02
BCKDHBP21953 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
BCKDHBP21953 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BCKDHBP21953 AP004607.7-201ENST00000527152 1677 ntBASIC21.4■■□□□ 1.02
BCKDHBP21953 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.4■■□□□ 1.02
BCKDHBP21953 POU5F1P3-201ENST00000428824 1078 ntBASIC21.4■■□□□ 1.02
BCKDHBP21953 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.4■■□□□ 1.02
BCKDHBP21953 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 RNA5SP413-201ENST00000516373 109 ntBASIC21.4■■□□□ 1.02
BCKDHBP21953 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.4■■□□□ 1.02
BCKDHBP21953 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BCKDHBP21953 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
BCKDHBP21953 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.39■■□□□ 1.02
BCKDHBP21953 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BCKDHBP21953 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BCKDHBP21953 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
BCKDHBP21953 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.39■■□□□ 1.01
BCKDHBP21953 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BCKDHBP21953 AC013268.1-206ENST00000638368 961 ntBASIC21.39■■□□□ 1.01
BCKDHBP21953 AC112229.1-201ENST00000639295 961 ntBASIC21.39■■□□□ 1.01
BCKDHBP21953 AC068338.2-201ENST00000563278 1430 ntBASIC21.38■■□□□ 1.01
BCKDHBP21953 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BCKDHBP21953 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BCKDHBP21953 TERF1P5-201ENST00000477545 1207 ntBASIC21.38■■□□□ 1.01
BCKDHBP21953 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
BCKDHBP21953 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.38■■□□□ 1.01
BCKDHBP21953 MIR4758-201ENST00000577688 71 ntBASIC21.38■■□□□ 1.01
BCKDHBP21953 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BCKDHBP21953 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
BCKDHBP21953 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.38■■□□□ 1.01
BCKDHBP21953 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.38■■□□□ 1.01
BCKDHBP21953 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.38■■□□□ 1.01
BCKDHBP21953 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms