Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRKCAP17252 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PRKCAP17252 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRKCAP17252 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.84■□□□□ 0.77
PRKCAP17252 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRKCAP17252 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PRKCAP17252 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
PRKCAP17252 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PRKCAP17252 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.84■□□□□ 0.77
PRKCAP17252 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.84■□□□□ 0.77
PRKCAP17252 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.84■□□□□ 0.77
PRKCAP17252 AC233992.3-201ENST00000607491 485 ntBASIC19.84■□□□□ 0.77
PRKCAP17252 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.84■□□□□ 0.77
PRKCAP17252 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 AC127496.7-201ENST00000625110 1798 ntBASIC19.84■□□□□ 0.77
PRKCAP17252 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.84■□□□□ 0.77
PRKCAP17252 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PRKCAP17252 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKCAP17252 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRKCAP17252 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRKCAP17252 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRKCAP17252 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PRKCAP17252 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.83■□□□□ 0.77
PRKCAP17252 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PRKCAP17252 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.83■□□□□ 0.77
PRKCAP17252 AL031432.3-201ENST00000607698 485 ntBASIC19.83■□□□□ 0.77
PRKCAP17252 CA15P2-201ENST00000611168 834 ntBASIC19.83■□□□□ 0.77
PRKCAP17252 AL355001.2-201ENST00000620617 1191 ntBASIC19.83■□□□□ 0.77
PRKCAP17252 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRKCAP17252 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRKCAP17252 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRKCAP17252 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRKCAP17252 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.83■□□□□ 0.76
PRKCAP17252 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRKCAP17252 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PRKCAP17252 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRKCAP17252 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKCAP17252 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKCAP17252 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PRKCAP17252 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKCAP17252 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKCAP17252 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PRKCAP17252 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.82■□□□□ 0.76
PRKCAP17252 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.82■□□□□ 0.76
PRKCAP17252 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKCAP17252 AP001330.3-201ENST00000520123 633 ntBASIC19.82■□□□□ 0.76
PRKCAP17252 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKCAP17252 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.82■□□□□ 0.76
PRKCAP17252 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRKCAP17252 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.81■□□□□ 0.76
PRKCAP17252 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PRKCAP17252 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PRKCAP17252 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PRKCAP17252 AP005435.1-201ENST00000529293 1178 ntBASIC19.81■□□□□ 0.76
PRKCAP17252 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.81■□□□□ 0.76
PRKCAP17252 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.81■□□□□ 0.76
PRKCAP17252 AC008764.7-201ENST00000593779 1081 ntBASIC19.81■□□□□ 0.76
PRKCAP17252 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PRKCAP17252 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKCAP17252 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.81■□□□□ 0.76
PRKCAP17252 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.8■□□□□ 0.76
PRKCAP17252 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 LINC00526-201ENST00000581067 1875 ntBASIC19.8■□□□□ 0.76
PRKCAP17252 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PRKCAP17252 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PRKCAP17252 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
PRKCAP17252 AF213884.3-201ENST00000563833 479 ntBASIC19.8■□□□□ 0.76
PRKCAP17252 AC087239.1-201ENST00000622671 572 ntBASIC19.8■□□□□ 0.76
PRKCAP17252 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.8■□□□□ 0.76
PRKCAP17252 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
PRKCAP17252 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKCAP17252 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
PRKCAP17252 ECEL1P1-201ENST00000373592 1742 ntBASIC19.79■□□□□ 0.76
PRKCAP17252 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PRKCAP17252 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKCAP17252 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKCAP17252 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKCAP17252 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRKCAP17252 MIR939-201ENST00000401314 82 ntBASIC19.79■□□□□ 0.76
PRKCAP17252 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms