Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H1CP16403 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1CP16403 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.32■□□□□ 0.68
HIST1H1CP16403 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1CP16403 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1CP16403 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1CP16403 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1CP16403 AC005229.4-201ENST00000610085 2198 ntBASIC19.32■□□□□ 0.68
HIST1H1CP16403 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.32■□□□□ 0.68
HIST1H1CP16403 OR2I1P-207ENST00000453522 948 ntBASIC19.32■□□□□ 0.68
HIST1H1CP16403 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HIST1H1CP16403 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HIST1H1CP16403 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.31■□□□□ 0.68
HIST1H1CP16403 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H1CP16403 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 AL512631.2-201ENST00000604634 923 ntBASIC19.31■□□□□ 0.68
HIST1H1CP16403 AC068587.7-201ENST00000641602 218 ntBASIC19.31■□□□□ 0.68
HIST1H1CP16403 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HIST1H1CP16403 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H1CP16403 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HIST1H1CP16403 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1CP16403 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST1H1CP16403 Z98882.1-201ENST00000622160 2253 ntBASIC19.3■□□□□ 0.68
HIST1H1CP16403 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 AC092171.4-201ENST00000609130 632 ntBASIC19.3■□□□□ 0.68
HIST1H1CP16403 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HIST1H1CP16403 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H1CP16403 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H1CP16403 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
HIST1H1CP16403 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1CP16403 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HIST1H1CP16403 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H1CP16403 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.29■□□□□ 0.68
HIST1H1CP16403 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H1CP16403 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1CP16403 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H1CP16403 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HIST1H1CP16403 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HIST1H1CP16403 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HIST1H1CP16403 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1CP16403 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HIST1H1CP16403 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HIST1H1CP16403 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1CP16403 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1CP16403 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1CP16403 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST1H1CP16403 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1CP16403 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1CP16403 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1CP16403 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 AC010525.1-201ENST00000585559 441 ntBASIC19.27■□□□□ 0.68
HIST1H1CP16403 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST1H1CP16403 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST1H1CP16403 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST1H1CP16403 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST1H1CP16403 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST1H1CP16403 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.67
HIST1H1CP16403 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST1H1CP16403 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1CP16403 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HIST1H1CP16403 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.26■□□□□ 0.67
HIST1H1CP16403 AC087239.1-201ENST00000622671 572 ntBASIC19.26■□□□□ 0.67
HIST1H1CP16403 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HIST1H1CP16403 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST1H1CP16403 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.26■□□□□ 0.67
HIST1H1CP16403 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HIST1H1CP16403 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.25■□□□□ 0.67
HIST1H1CP16403 AC010141.3-201ENST00000456659 717 ntBASIC19.25■□□□□ 0.67
HIST1H1CP16403 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms