Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
COL11A2P13942 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.74■■□□□ 1.87
COL11A2P13942 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL11A2P13942 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.74■■□□□ 1.87
COL11A2P13942 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.74■■□□□ 1.87
COL11A2P13942 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.73■■□□□ 1.87
COL11A2P13942 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.73■■□□□ 1.87
COL11A2P13942 MIPEPP3-201ENST00000412105 444 ntBASIC26.73■■□□□ 1.87
COL11A2P13942 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL11A2P13942 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.73■■□□□ 1.87
COL11A2P13942 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.73■■□□□ 1.87
COL11A2P13942 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
COL11A2P13942 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL11A2P13942 AC020928.2-201ENST00000588717 2197 ntBASIC26.73■■□□□ 1.87
COL11A2P13942 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL11A2P13942 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL11A2P13942 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.73■■□□□ 1.87
COL11A2P13942 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.73■■□□□ 1.87
COL11A2P13942 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.73■■□□□ 1.87
COL11A2P13942 MYC-209ENST00000641252 345 ntBASIC26.73■■□□□ 1.87
COL11A2P13942 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL11A2P13942 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
COL11A2P13942 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.72■■□□□ 1.87
COL11A2P13942 LINC01960-201ENST00000563759 1884 ntBASIC26.72■■□□□ 1.87
COL11A2P13942 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL11A2P13942 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.72■■□□□ 1.87
COL11A2P13942 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
COL11A2P13942 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.72■■□□□ 1.87
COL11A2P13942 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL11A2P13942 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.72■■□□□ 1.87
COL11A2P13942 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL11A2P13942 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.72■■□□□ 1.87
COL11A2P13942 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.72■■□□□ 1.87
COL11A2P13942 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.72■■□□□ 1.87
COL11A2P13942 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.72■■□□□ 1.87
COL11A2P13942 AC092118.2-201ENST00000613495 667 ntBASIC26.72■■□□□ 1.87
COL11A2P13942 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL11A2P13942 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL11A2P13942 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL11A2P13942 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL11A2P13942 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL11A2P13942 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL11A2P13942 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.71■■□□□ 1.87
COL11A2P13942 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.71■■□□□ 1.87
COL11A2P13942 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL11A2P13942 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.71■■□□□ 1.87
COL11A2P13942 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.71■■□□□ 1.87
COL11A2P13942 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
COL11A2P13942 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.71■■□□□ 1.87
COL11A2P13942 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.71■■□□□ 1.87
COL11A2P13942 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL11A2P13942 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.71■■□□□ 1.87
COL11A2P13942 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
COL11A2P13942 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.7■■□□□ 1.87
COL11A2P13942 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.7■■□□□ 1.87
COL11A2P13942 MIR4758-201ENST00000577688 71 ntBASIC26.7■■□□□ 1.87
COL11A2P13942 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
COL11A2P13942 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
COL11A2P13942 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
COL11A2P13942 KRT18P29-201ENST00000397031 1267 ntBASIC26.7■■□□□ 1.86
COL11A2P13942 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.7■■□□□ 1.86
COL11A2P13942 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL11A2P13942 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL11A2P13942 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 AP004607.7-201ENST00000527152 1677 ntBASIC26.69■■□□□ 1.86
COL11A2P13942 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL11A2P13942 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.69■■□□□ 1.86
COL11A2P13942 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL11A2P13942 AP006587.3-201ENST00000525742 1516 ntBASIC26.69■■□□□ 1.86
COL11A2P13942 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL11A2P13942 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL11A2P13942 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL11A2P13942 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
COL11A2P13942 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL11A2P13942 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.69■■□□□ 1.86
COL11A2P13942 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COL11A2P13942 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.68■■□□□ 1.86
COL11A2P13942 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
COL11A2P13942 GCSHP5-201ENST00000443090 522 ntBASIC26.68■■□□□ 1.86
COL11A2P13942 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.68■■□□□ 1.86
COL11A2P13942 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.68■■□□□ 1.86
COL11A2P13942 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
COL11A2P13942 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL11A2P13942 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.68■■□□□ 1.86
COL11A2P13942 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL11A2P13942 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL11A2P13942 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL11A2P13942 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.67■■□□□ 1.86
COL11A2P13942 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms