Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPSAP08865 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPSAP08865 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPSAP08865 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPSAP08865 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPSAP08865 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPSAP08865 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.7■□□□□ 0.91
RPSAP08865 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.7■□□□□ 0.9
RPSAP08865 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.7■□□□□ 0.9
RPSAP08865 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.7■□□□□ 0.9
RPSAP08865 MIR3648-2-201ENST00000581792 180 ntBASIC20.7■□□□□ 0.9
RPSAP08865 MIR3648-1-201ENST00000615959 180 ntBASIC20.7■□□□□ 0.9
RPSAP08865 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
RPSAP08865 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPSAP08865 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPSAP08865 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPSAP08865 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPSAP08865 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.69■□□□□ 0.9
RPSAP08865 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPSAP08865 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPSAP08865 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPSAP08865 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPSAP08865 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.69■□□□□ 0.9
RPSAP08865 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.69■□□□□ 0.9
RPSAP08865 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPSAP08865 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.69■□□□□ 0.9
RPSAP08865 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPSAP08865 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPSAP08865 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPSAP08865 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RPSAP08865 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPSAP08865 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPSAP08865 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPSAP08865 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPSAP08865 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.68■□□□□ 0.9
RPSAP08865 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPSAP08865 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPSAP08865 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RPSAP08865 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPSAP08865 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.67■□□□□ 0.9
RPSAP08865 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.67■□□□□ 0.9
RPSAP08865 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.67■□□□□ 0.9
RPSAP08865 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPSAP08865 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.67■□□□□ 0.9
RPSAP08865 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
RPSAP08865 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 AC025884.2-201ENST00000553429 711 ntBASIC20.66■□□□□ 0.9
RPSAP08865 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.66■□□□□ 0.9
RPSAP08865 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RPSAP08865 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPSAP08865 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.65■□□□□ 0.9
RPSAP08865 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.65■□□□□ 0.9
RPSAP08865 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 KRT18P10-201ENST00000388836 1287 ntBASIC20.65■□□□□ 0.9
RPSAP08865 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.65■□□□□ 0.9
RPSAP08865 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPSAP08865 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.65■□□□□ 0.9
RPSAP08865 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPSAP08865 LETM1P2-201ENST00000597330 2178 ntBASIC20.65■□□□□ 0.9
RPSAP08865 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RPSAP08865 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPSAP08865 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPSAP08865 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPSAP08865 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPSAP08865 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms