Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.61■■□□□ 1.37
CHRNA1P02708 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.61■■□□□ 1.37
CHRNA1P02708 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CHRNA1P02708 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA1P02708 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.61■■□□□ 1.37
CHRNA1P02708 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CHRNA1P02708 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHRNA1P02708 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
CHRNA1P02708 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.61■■□□□ 1.37
CHRNA1P02708 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.6■■□□□ 1.37
CHRNA1P02708 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.6■■□□□ 1.37
CHRNA1P02708 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA1P02708 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA1P02708 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA1P02708 AC007322.1-201ENST00000426983 750 ntBASIC23.6■■□□□ 1.37
CHRNA1P02708 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA1P02708 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.6■■□□□ 1.37
CHRNA1P02708 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.6■■□□□ 1.37
CHRNA1P02708 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.6■■□□□ 1.37
CHRNA1P02708 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.6■■□□□ 1.37
CHRNA1P02708 AL121832.2-201ENST00000610979 668 ntBASIC23.6■■□□□ 1.37
CHRNA1P02708 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CHRNA1P02708 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CHRNA1P02708 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.6■■□□□ 1.37
CHRNA1P02708 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.6■■□□□ 1.37
CHRNA1P02708 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA1P02708 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA1P02708 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 OR7E47P-201ENST00000546390 1422 ntBASIC23.59■■□□□ 1.37
CHRNA1P02708 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 AC142086.2-201ENST00000569753 217 ntBASIC23.59■■□□□ 1.37
CHRNA1P02708 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 AC005181.1-201ENST00000604782 1256 ntBASIC23.59■■□□□ 1.37
CHRNA1P02708 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.59■■□□□ 1.37
CHRNA1P02708 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA1P02708 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.58■■□□□ 1.37
CHRNA1P02708 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.58■■□□□ 1.37
CHRNA1P02708 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA1P02708 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.58■■□□□ 1.37
CHRNA1P02708 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
CHRNA1P02708 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.58■■□□□ 1.37
CHRNA1P02708 AC010141.2-201ENST00000452426 721 ntBASIC23.58■■□□□ 1.37
CHRNA1P02708 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.58■■□□□ 1.37
CHRNA1P02708 AC138907.5-202ENST00000569484 235 ntBASIC23.58■■□□□ 1.37
CHRNA1P02708 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
CHRNA1P02708 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.58■■□□□ 1.37
CHRNA1P02708 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA1P02708 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CHRNA1P02708 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHRNA1P02708 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.58■■□□□ 1.36
CHRNA1P02708 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHRNA1P02708 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
CHRNA1P02708 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.57■■□□□ 1.36
CHRNA1P02708 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.57■■□□□ 1.36
CHRNA1P02708 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHRNA1P02708 GUSBP6-202ENST00000438529 1198 ntBASIC23.57■■□□□ 1.36
CHRNA1P02708 TSPY6P-201ENST00000448518 926 ntBASIC23.57■■□□□ 1.36
CHRNA1P02708 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHRNA1P02708 SLC7A5P2-201ENST00000553010 536 ntBASIC23.57■■□□□ 1.36
CHRNA1P02708 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.57■■□□□ 1.36
CHRNA1P02708 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.57■■□□□ 1.36
CHRNA1P02708 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.57■■□□□ 1.36
CHRNA1P02708 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHRNA1P02708 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHRNA1P02708 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CHRNA1P02708 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.56■■□□□ 1.36
CHRNA1P02708 CNN2P6-201ENST00000439038 900 ntBASIC23.56■■□□□ 1.36
CHRNA1P02708 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHRNA1P02708 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHRNA1P02708 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.55■■□□□ 1.36
CHRNA1P02708 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHRNA1P02708 ABHD17AP1-201ENST00000358206 933 ntBASIC23.55■■□□□ 1.36
CHRNA1P02708 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.55■■□□□ 1.36
CHRNA1P02708 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.55■■□□□ 1.36
CHRNA1P02708 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.55■■□□□ 1.36
CHRNA1P02708 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHRNA1P02708 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHRNA1P02708 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHRNA1P02708 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHRNA1P02708 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHRNA1P02708 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CHRNA1P02708 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.54■■□□□ 1.36
CHRNA1P02708 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.54■■□□□ 1.36
CHRNA1P02708 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
CHRNA1P02708 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.54■■□□□ 1.36
CHRNA1P02708 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CHRNA1P02708 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms