Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRIM3O75382 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20■□□□□ 0.79
TRIM3O75382 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20■□□□□ 0.79
TRIM3O75382 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20■□□□□ 0.79
TRIM3O75382 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20■□□□□ 0.79
TRIM3O75382 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRIM3O75382 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 RARRES2P6-201ENST00000567333 442 ntBASIC19.99■□□□□ 0.79
TRIM3O75382 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM3O75382 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM3O75382 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM3O75382 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM3O75382 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM3O75382 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM3O75382 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM3O75382 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 AC026271.2-201ENST00000428091 497 ntBASIC19.98■□□□□ 0.79
TRIM3O75382 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM3O75382 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRIM3O75382 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM3O75382 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM3O75382 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM3O75382 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM3O75382 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM3O75382 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM3O75382 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM3O75382 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM3O75382 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM3O75382 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM3O75382 AC007375.3-201ENST00000600936 2314 ntBASIC19.96■□□□□ 0.79
TRIM3O75382 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.96■□□□□ 0.79
TRIM3O75382 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM3O75382 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
TRIM3O75382 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM3O75382 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM3O75382 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM3O75382 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM3O75382 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM3O75382 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM3O75382 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM3O75382 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM3O75382 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM3O75382 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM3O75382 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM3O75382 AL358852.1-201ENST00000623174 1268 ntBASIC19.95■□□□□ 0.78
TRIM3O75382 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM3O75382 ESRRAP2-201ENST00000418437 1549 ntBASIC19.95■□□□□ 0.78
TRIM3O75382 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM3O75382 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM3O75382 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM3O75382 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM3O75382 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM3O75382 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM3O75382 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM3O75382 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM3O75382 AC010141.3-201ENST00000456659 717 ntBASIC19.94■□□□□ 0.78
TRIM3O75382 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM3O75382 MIR6821-201ENST00000617625 74 ntBASIC19.94■□□□□ 0.78
TRIM3O75382 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM3O75382 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM3O75382 AC087239.1-201ENST00000622671 572 ntBASIC19.94■□□□□ 0.78
TRIM3O75382 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM3O75382 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM3O75382 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms