Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD6O75340 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD6O75340 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.18■□□□□ 0.5
PDCD6O75340 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD6O75340 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDCD6O75340 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDCD6O75340 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDCD6O75340 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD6O75340 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD6O75340 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.17■□□□□ 0.5
PDCD6O75340 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.17■□□□□ 0.5
PDCD6O75340 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.17■□□□□ 0.5
PDCD6O75340 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.17■□□□□ 0.5
PDCD6O75340 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.17■□□□□ 0.5
PDCD6O75340 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD6O75340 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD6O75340 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD6O75340 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD6O75340 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.16■□□□□ 0.5
PDCD6O75340 Z98882.1-201ENST00000622160 2253 ntBASIC18.16■□□□□ 0.5
PDCD6O75340 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD6O75340 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD6O75340 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PDCD6O75340 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD6O75340 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.15■□□□□ 0.5
PDCD6O75340 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD6O75340 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDCD6O75340 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD6O75340 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD6O75340 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.15■□□□□ 0.5
PDCD6O75340 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDCD6O75340 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.15■□□□□ 0.5
PDCD6O75340 AC087239.1-201ENST00000622671 572 ntBASIC18.15■□□□□ 0.5
PDCD6O75340 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDCD6O75340 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDCD6O75340 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
PDCD6O75340 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDCD6O75340 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDCD6O75340 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD6O75340 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.14■□□□□ 0.49
PDCD6O75340 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PDCD6O75340 OR2I1P-207ENST00000453522 948 ntBASIC18.14■□□□□ 0.49
PDCD6O75340 MIR3181-201ENST00000578512 73 ntBASIC18.14■□□□□ 0.49
PDCD6O75340 MIR3621-201ENST00000580529 85 ntBASIC18.14■□□□□ 0.49
PDCD6O75340 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD6O75340 AL035685.1-201ENST00000636663 812 ntBASIC18.14■□□□□ 0.49
PDCD6O75340 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.14■□□□□ 0.49
PDCD6O75340 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDCD6O75340 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDCD6O75340 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDCD6O75340 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD6O75340 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
PDCD6O75340 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 AC005229.4-201ENST00000610085 2198 ntBASIC18.13■□□□□ 0.49
PDCD6O75340 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.13■□□□□ 0.49
PDCD6O75340 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.13■□□□□ 0.49
PDCD6O75340 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDCD6O75340 AC092171.4-201ENST00000609130 632 ntBASIC18.13■□□□□ 0.49
PDCD6O75340 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
PDCD6O75340 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.13■□□□□ 0.49
PDCD6O75340 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDCD6O75340 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDCD6O75340 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDCD6O75340 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 SRD5A1P1-201ENST00000442297 786 ntBASIC18.12■□□□□ 0.49
PDCD6O75340 AC104564.3-201ENST00000582367 638 ntBASIC18.12■□□□□ 0.49
PDCD6O75340 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.12■□□□□ 0.49
PDCD6O75340 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD6O75340 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD6O75340 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms