Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
MMP20O60882 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
MMP20O60882 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.49■■□□□ 1.03
MMP20O60882 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.49■■□□□ 1.03
MMP20O60882 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.49■■□□□ 1.03
MMP20O60882 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.49■■□□□ 1.03
MMP20O60882 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP20O60882 AL137784.2-201ENST00000607332 1000 ntBASIC21.49■■□□□ 1.03
MMP20O60882 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.49■■□□□ 1.03
MMP20O60882 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MMP20O60882 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP20O60882 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MMP20O60882 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MMP20O60882 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.48■■□□□ 1.03
MMP20O60882 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.48■■□□□ 1.03
MMP20O60882 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP20O60882 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 AC139530.1-201ENST00000575312 1977 ntBASIC21.48■■□□□ 1.03
MMP20O60882 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.48■■□□□ 1.03
MMP20O60882 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
MMP20O60882 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP20O60882 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
MMP20O60882 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP20O60882 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP20O60882 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP20O60882 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP20O60882 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP20O60882 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.47■■□□□ 1.03
MMP20O60882 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
MMP20O60882 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
MMP20O60882 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP20O60882 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP20O60882 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP20O60882 AC004911.1-201ENST00000416316 871 ntBASIC21.46■■□□□ 1.03
MMP20O60882 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.46■■□□□ 1.03
MMP20O60882 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP20O60882 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP20O60882 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP20O60882 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP20O60882 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP20O60882 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.45■■□□□ 1.02
MMP20O60882 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP20O60882 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP20O60882 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP20O60882 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP20O60882 AC055733.4-201ENST00000638462 1354 ntBASIC21.45■■□□□ 1.02
MMP20O60882 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP20O60882 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP20O60882 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
MMP20O60882 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MMP20O60882 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP20O60882 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP20O60882 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP20O60882 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP20O60882 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.44■■□□□ 1.02
MMP20O60882 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP20O60882 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
MMP20O60882 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP20O60882 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
MMP20O60882 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP20O60882 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
MMP20O60882 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP20O60882 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP20O60882 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP20O60882 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.43■■□□□ 1.02
MMP20O60882 AC137761.2-201ENST00000561729 223 ntBASIC21.43■■□□□ 1.02
MMP20O60882 AC145350.3-201ENST00000569033 163 ntBASIC21.43■■□□□ 1.02
MMP20O60882 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP20O60882 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms