Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.32■■□□□ 1.64
CTNND1O60716 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CTNND1O60716 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CTNND1O60716 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CTNND1O60716 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CTNND1O60716 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CTNND1O60716 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CTNND1O60716 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.31■■□□□ 1.64
CTNND1O60716 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.31■■□□□ 1.64
CTNND1O60716 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.31■■□□□ 1.64
CTNND1O60716 AP004607.7-201ENST00000527152 1677 ntBASIC25.31■■□□□ 1.64
CTNND1O60716 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CTNND1O60716 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.31■■□□□ 1.64
CTNND1O60716 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
CTNND1O60716 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.3■■□□□ 1.64
CTNND1O60716 GUSBP6-202ENST00000438529 1198 ntBASIC25.3■■□□□ 1.64
CTNND1O60716 KRT18P20-201ENST00000548986 1279 ntBASIC25.3■■□□□ 1.64
CTNND1O60716 AC138907.5-202ENST00000569484 235 ntBASIC25.3■■□□□ 1.64
CTNND1O60716 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CTNND1O60716 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CTNND1O60716 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CTNND1O60716 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CTNND1O60716 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CTNND1O60716 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CTNND1O60716 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.29■■□□□ 1.64
CTNND1O60716 AC010141.2-201ENST00000452426 721 ntBASIC25.29■■□□□ 1.64
CTNND1O60716 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.29■■□□□ 1.64
CTNND1O60716 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CTNND1O60716 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CTNND1O60716 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.28■■□□□ 1.64
CTNND1O60716 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.28■■□□□ 1.64
CTNND1O60716 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.28■■□□□ 1.64
CTNND1O60716 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.28■■□□□ 1.64
CTNND1O60716 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.28■■□□□ 1.64
CTNND1O60716 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CTNND1O60716 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CTNND1O60716 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CTNND1O60716 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.27■■□□□ 1.64
CTNND1O60716 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.27■■□□□ 1.64
CTNND1O60716 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.27■■□□□ 1.64
CTNND1O60716 CD99P1-205ENST00000527459 561 ntBASIC25.27■■□□□ 1.64
CTNND1O60716 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.27■■□□□ 1.64
CTNND1O60716 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.27■■□□□ 1.64
CTNND1O60716 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CTNND1O60716 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CTNND1O60716 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CTNND1O60716 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CTNND1O60716 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CTNND1O60716 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CTNND1O60716 CNN2P6-201ENST00000439038 900 ntBASIC25.26■■□□□ 1.63
CTNND1O60716 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.26■■□□□ 1.63
CTNND1O60716 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.26■■□□□ 1.63
CTNND1O60716 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CTNND1O60716 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.26■■□□□ 1.63
CTNND1O60716 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CTNND1O60716 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CTNND1O60716 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CTNND1O60716 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CTNND1O60716 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.25■■□□□ 1.63
CTNND1O60716 OR7E47P-201ENST00000546390 1422 ntBASIC25.25■■□□□ 1.63
CTNND1O60716 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
CTNND1O60716 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.25■■□□□ 1.63
CTNND1O60716 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CTNND1O60716 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.25■■□□□ 1.63
CTNND1O60716 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.25■■□□□ 1.63
CTNND1O60716 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.25■■□□□ 1.63
CTNND1O60716 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CTNND1O60716 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.24■■□□□ 1.63
CTNND1O60716 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CTNND1O60716 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CTNND1O60716 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CTNND1O60716 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.24■■□□□ 1.63
CTNND1O60716 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CTNND1O60716 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CTNND1O60716 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.24■■□□□ 1.63
CTNND1O60716 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.24■■□□□ 1.63
CTNND1O60716 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CTNND1O60716 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CTNND1O60716 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CTNND1O60716 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CTNND1O60716 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.23■■□□□ 1.63
CTNND1O60716 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.23■■□□□ 1.63
CTNND1O60716 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CTNND1O60716 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CTNND1O60716 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CTNND1O60716 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.23■■□□□ 1.63
CTNND1O60716 AL034346.1-201ENST00000568244 1277 ntBASIC25.23■■□□□ 1.63
CTNND1O60716 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms