Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PEX1O43933 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PEX1O43933 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.87■□□□□ 0.93
PEX1O43933 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.87■□□□□ 0.93
PEX1O43933 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PEX1O43933 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.87■□□□□ 0.93
PEX1O43933 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.87■□□□□ 0.93
PEX1O43933 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PEX1O43933 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PEX1O43933 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.86■□□□□ 0.93
PEX1O43933 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PEX1O43933 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PEX1O43933 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.86■□□□□ 0.93
PEX1O43933 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PEX1O43933 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PEX1O43933 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PEX1O43933 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PEX1O43933 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.86■□□□□ 0.93
PEX1O43933 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.86■□□□□ 0.93
PEX1O43933 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.86■□□□□ 0.93
PEX1O43933 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.86■□□□□ 0.93
PEX1O43933 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PEX1O43933 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
PEX1O43933 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PEX1O43933 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.85■□□□□ 0.93
PEX1O43933 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.85■□□□□ 0.93
PEX1O43933 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PEX1O43933 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.85■□□□□ 0.93
PEX1O43933 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.85■□□□□ 0.93
PEX1O43933 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PEX1O43933 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PEX1O43933 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PEX1O43933 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PEX1O43933 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PEX1O43933 LINC01521-201ENST00000504184 1943 ntBASIC20.84■□□□□ 0.93
PEX1O43933 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PEX1O43933 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PEX1O43933 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.84■□□□□ 0.93
PEX1O43933 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PEX1O43933 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PEX1O43933 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.84■□□□□ 0.93
PEX1O43933 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PEX1O43933 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PEX1O43933 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.84■□□□□ 0.93
PEX1O43933 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PEX1O43933 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PEX1O43933 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.83■□□□□ 0.93
PEX1O43933 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PEX1O43933 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.83■□□□□ 0.93
PEX1O43933 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PEX1O43933 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PEX1O43933 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PEX1O43933 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PEX1O43933 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PEX1O43933 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PEX1O43933 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PEX1O43933 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PEX1O43933 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
PEX1O43933 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PEX1O43933 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PEX1O43933 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PEX1O43933 AC087742.1-201ENST00000575880 1738 ntBASIC20.82■□□□□ 0.92
PEX1O43933 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PEX1O43933 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.82■□□□□ 0.92
PEX1O43933 UNC93B3-201ENST00000308076 687 ntBASIC20.82■□□□□ 0.92
PEX1O43933 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PEX1O43933 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.82■□□□□ 0.92
PEX1O43933 PBX2P1-201ENST00000493219 1291 ntBASIC20.82■□□□□ 0.92
PEX1O43933 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PEX1O43933 AC005837.3-201ENST00000612163 286 ntBASIC20.82■□□□□ 0.92
PEX1O43933 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.82■□□□□ 0.92
PEX1O43933 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PEX1O43933 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
PEX1O43933 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
PEX1O43933 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.81■□□□□ 0.92
PEX1O43933 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.81■□□□□ 0.92
PEX1O43933 AC133561.4-201ENST00000566112 224 ntBASIC20.81■□□□□ 0.92
PEX1O43933 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.81■□□□□ 0.92
PEX1O43933 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
PEX1O43933 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.81■□□□□ 0.92
PEX1O43933 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PEX1O43933 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PEX1O43933 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PEX1O43933 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.8■□□□□ 0.92
PEX1O43933 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PEX1O43933 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PEX1O43933 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PEX1O43933 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.8■□□□□ 0.92
PEX1O43933 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PEX1O43933 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PEX1O43933 AC106739.1-201ENST00000617035 715 ntBASIC20.8■□□□□ 0.92
PEX1O43933 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.8■□□□□ 0.92
PEX1O43933 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms