Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPM1DO15297 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPM1DO15297 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPM1DO15297 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPM1DO15297 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.99■□□□□ 0.95
PPM1DO15297 AC006015.1-201ENST00000429970 570 ntBASIC20.99■□□□□ 0.95
PPM1DO15297 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.99■□□□□ 0.95
PPM1DO15297 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.99■□□□□ 0.95
PPM1DO15297 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.99■□□□□ 0.95
PPM1DO15297 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPM1DO15297 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPM1DO15297 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.99■□□□□ 0.95
PPM1DO15297 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPM1DO15297 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPM1DO15297 AC005224.4-201ENST00000583262 1652 ntBASIC20.99■□□□□ 0.95
PPM1DO15297 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.98■□□□□ 0.95
PPM1DO15297 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPM1DO15297 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.98■□□□□ 0.95
PPM1DO15297 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.98■□□□□ 0.95
PPM1DO15297 AC137761.2-201ENST00000561729 223 ntBASIC20.98■□□□□ 0.95
PPM1DO15297 AC145350.3-201ENST00000569033 163 ntBASIC20.98■□□□□ 0.95
PPM1DO15297 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
PPM1DO15297 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PPM1DO15297 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPM1DO15297 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPM1DO15297 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.97■□□□□ 0.95
PPM1DO15297 AC009237.3-201ENST00000393279 1427 ntBASIC20.97■□□□□ 0.95
PPM1DO15297 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.97■□□□□ 0.95
PPM1DO15297 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 AC079140.4-201ENST00000507448 529 ntBASIC20.97■□□□□ 0.95
PPM1DO15297 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.97■□□□□ 0.95
PPM1DO15297 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.97■□□□□ 0.95
PPM1DO15297 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PPM1DO15297 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPM1DO15297 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPM1DO15297 AC016769.1-201ENST00000409132 1010 ntBASIC20.96■□□□□ 0.95
PPM1DO15297 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.96■□□□□ 0.95
PPM1DO15297 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.96■□□□□ 0.95
PPM1DO15297 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.96■□□□□ 0.95
PPM1DO15297 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.96■□□□□ 0.95
PPM1DO15297 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.96■□□□□ 0.95
PPM1DO15297 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.96■□□□□ 0.95
PPM1DO15297 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPM1DO15297 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.96■□□□□ 0.95
PPM1DO15297 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.96■□□□□ 0.95
PPM1DO15297 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PPM1DO15297 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPM1DO15297 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.96■□□□□ 0.95
PPM1DO15297 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPM1DO15297 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PPM1DO15297 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPM1DO15297 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.95■□□□□ 0.94
PPM1DO15297 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPM1DO15297 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPM1DO15297 KRT19P1-201ENST00000405746 1186 ntBASIC20.95■□□□□ 0.94
PPM1DO15297 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PPM1DO15297 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPM1DO15297 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPM1DO15297 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.94■□□□□ 0.94
PPM1DO15297 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PPM1DO15297 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.94■□□□□ 0.94
PPM1DO15297 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PPM1DO15297 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PPM1DO15297 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.94■□□□□ 0.94
PPM1DO15297 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPM1DO15297 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PPM1DO15297 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PPM1DO15297 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPM1DO15297 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPM1DO15297 AC087742.1-201ENST00000575880 1738 ntBASIC20.93■□□□□ 0.94
PPM1DO15297 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.93■□□□□ 0.94
PPM1DO15297 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.93■□□□□ 0.94
PPM1DO15297 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.93■□□□□ 0.94
PPM1DO15297 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPM1DO15297 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PPM1DO15297 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PPM1DO15297 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PPM1DO15297 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms