Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SURF4O15260 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
SURF4O15260 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SURF4O15260 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.43■□□□□ 0.7
SURF4O15260 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 FEM1AP4-201ENST00000443167 1987 ntBASIC19.43■□□□□ 0.7
SURF4O15260 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.43■□□□□ 0.7
SURF4O15260 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.43■□□□□ 0.7
SURF4O15260 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SURF4O15260 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SURF4O15260 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.42■□□□□ 0.7
SURF4O15260 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 AC079089.2-201ENST00000531211 1277 ntBASIC19.42■□□□□ 0.7
SURF4O15260 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SURF4O15260 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.42■□□□□ 0.7
SURF4O15260 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
SURF4O15260 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SURF4O15260 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SURF4O15260 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.42■□□□□ 0.7
SURF4O15260 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SURF4O15260 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.42■□□□□ 0.7
SURF4O15260 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SURF4O15260 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
SURF4O15260 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SURF4O15260 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.41■□□□□ 0.7
SURF4O15260 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 AF106564.1-201ENST00000607058 2553 ntBASIC19.41■□□□□ 0.7
SURF4O15260 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SURF4O15260 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SURF4O15260 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.41■□□□□ 0.7
SURF4O15260 AC026471.6-201ENST00000622954 1905 ntBASIC19.41■□□□□ 0.7
SURF4O15260 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.41■□□□□ 0.7
SURF4O15260 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.41■□□□□ 0.7
SURF4O15260 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SURF4O15260 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.41■□□□□ 0.7
SURF4O15260 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SURF4O15260 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.4■□□□□ 0.7
SURF4O15260 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.4■□□□□ 0.7
SURF4O15260 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.4■□□□□ 0.7
SURF4O15260 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SURF4O15260 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.4■□□□□ 0.7
SURF4O15260 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.4■□□□□ 0.7
SURF4O15260 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SURF4O15260 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.39■□□□□ 0.69
SURF4O15260 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.39■□□□□ 0.69
SURF4O15260 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.39■□□□□ 0.69
SURF4O15260 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.39■□□□□ 0.69
SURF4O15260 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SURF4O15260 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.38■□□□□ 0.69
SURF4O15260 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.38■□□□□ 0.69
SURF4O15260 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.38■□□□□ 0.69
SURF4O15260 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.38■□□□□ 0.69
SURF4O15260 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SURF4O15260 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SURF4O15260 AL117332.1-201ENST00000622628 974 ntBASIC19.38■□□□□ 0.69
SURF4O15260 AC241377.3-202ENST00000626088 1088 ntBASIC19.38■□□□□ 0.69
SURF4O15260 AC241585.3-202ENST00000628937 1088 ntBASIC19.38■□□□□ 0.69
SURF4O15260 AC245100.8-202ENST00000629247 1058 ntBASIC19.38■□□□□ 0.69
SURF4O15260 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SURF4O15260 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SURF4O15260 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SURF4O15260 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms