Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TO15178 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TO15178 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.87■□□□□ 0.77
TO15178 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.87■□□□□ 0.77
TO15178 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.87■□□□□ 0.77
TO15178 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.87■□□□□ 0.77
TO15178 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.87■□□□□ 0.77
TO15178 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TO15178 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.87■□□□□ 0.77
TO15178 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TO15178 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.87■□□□□ 0.77
TO15178 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TO15178 AP004607.7-201ENST00000527152 1677 ntBASIC19.87■□□□□ 0.77
TO15178 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TO15178 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TO15178 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TO15178 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.86■□□□□ 0.77
TO15178 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TO15178 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TO15178 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.86■□□□□ 0.77
TO15178 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.86■□□□□ 0.77
TO15178 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.86■□□□□ 0.77
TO15178 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.86■□□□□ 0.77
TO15178 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TO15178 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TO15178 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.85■□□□□ 0.77
TO15178 AC009237.3-201ENST00000393279 1427 ntBASIC19.85■□□□□ 0.77
TO15178 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.85■□□□□ 0.77
TO15178 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
TO15178 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.85■□□□□ 0.77
TO15178 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TO15178 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TO15178 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.84■□□□□ 0.77
TO15178 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
TO15178 CLDN5-201ENST00000403084 2357 ntBASIC19.84■□□□□ 0.77
TO15178 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TO15178 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TO15178 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
TO15178 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TO15178 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.84■□□□□ 0.77
TO15178 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TO15178 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TO15178 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TO15178 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TO15178 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TO15178 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.83■□□□□ 0.77
TO15178 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.83■□□□□ 0.77
TO15178 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.83■□□□□ 0.77
TO15178 TPRG1LP1-201ENST00000598702 760 ntBASIC19.83■□□□□ 0.77
TO15178 MIR6084-201ENST00000622012 110 ntBASIC19.83■□□□□ 0.77
TO15178 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TO15178 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.83■□□□□ 0.76
TO15178 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TO15178 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TO15178 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TO15178 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TO15178 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.83■□□□□ 0.76
TO15178 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.82■□□□□ 0.76
TO15178 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
TO15178 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TO15178 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.82■□□□□ 0.76
TO15178 AC123595.1-201ENST00000440769 1046 ntBASIC19.82■□□□□ 0.76
TO15178 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TO15178 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
TO15178 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.81■□□□□ 0.76
TO15178 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TO15178 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TO15178 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.81■□□□□ 0.76
TO15178 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms