Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.03■□□□□ 0.96
CDX4O14627 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.03■□□□□ 0.96
CDX4O14627 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDX4O14627 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
CDX4O14627 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.02■□□□□ 0.96
CDX4O14627 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.02■□□□□ 0.96
CDX4O14627 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.02■□□□□ 0.96
CDX4O14627 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.02■□□□□ 0.96
CDX4O14627 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.02■□□□□ 0.96
CDX4O14627 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
CDX4O14627 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.02■□□□□ 0.96
CDX4O14627 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.02■□□□□ 0.96
CDX4O14627 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.02■□□□□ 0.96
CDX4O14627 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDX4O14627 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CDX4O14627 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CDX4O14627 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.01■□□□□ 0.95
CDX4O14627 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDX4O14627 AL158047.1-201ENST00000445918 881 ntBASIC21.01■□□□□ 0.95
CDX4O14627 RPS2P4-201ENST00000476944 856 ntBASIC21.01■□□□□ 0.95
CDX4O14627 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.01■□□□□ 0.95
CDX4O14627 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDX4O14627 MYC-209ENST00000641252 345 ntBASIC21.01■□□□□ 0.95
CDX4O14627 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CDX4O14627 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDX4O14627 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDX4O14627 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDX4O14627 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDX4O14627 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDX4O14627 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDX4O14627 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21■□□□□ 0.95
CDX4O14627 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21■□□□□ 0.95
CDX4O14627 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDX4O14627 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21■□□□□ 0.95
CDX4O14627 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CDX4O14627 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDX4O14627 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21■□□□□ 0.95
CDX4O14627 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21■□□□□ 0.95
CDX4O14627 AC142381.4-202ENST00000563973 229 ntBASIC21■□□□□ 0.95
CDX4O14627 AC016405.3-201ENST00000607710 860 ntBASIC21■□□□□ 0.95
CDX4O14627 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDX4O14627 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDX4O14627 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDX4O14627 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDX4O14627 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.99■□□□□ 0.95
CDX4O14627 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 BX276092.2-201ENST00000417668 665 ntBASIC20.99■□□□□ 0.95
CDX4O14627 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.99■□□□□ 0.95
CDX4O14627 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.99■□□□□ 0.95
CDX4O14627 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDX4O14627 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDX4O14627 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDX4O14627 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.98■□□□□ 0.95
CDX4O14627 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDX4O14627 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDX4O14627 AC097658.1-201ENST00000475555 843 ntBASIC20.98■□□□□ 0.95
CDX4O14627 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.98■□□□□ 0.95
CDX4O14627 AC006058.3-201ENST00000606217 1069 ntBASIC20.98■□□□□ 0.95
CDX4O14627 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.98■□□□□ 0.95
CDX4O14627 AC008694.1-202ENST00000636953 945 ntBASIC20.98■□□□□ 0.95
CDX4O14627 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CDX4O14627 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.98■□□□□ 0.95
CDX4O14627 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.98■□□□□ 0.95
CDX4O14627 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 AC142381.3-201ENST00000568208 1670 ntBASIC20.97■□□□□ 0.95
CDX4O14627 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.97■□□□□ 0.95
CDX4O14627 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDX4O14627 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.97■□□□□ 0.95
CDX4O14627 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.97■□□□□ 0.95
CDX4O14627 AC128676.1-201ENST00000454392 318 ntBASIC20.97■□□□□ 0.95
CDX4O14627 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CDX4O14627 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDX4O14627 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.97■□□□□ 0.95
CDX4O14627 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.97■□□□□ 0.95
CDX4O14627 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.97■□□□□ 0.95
CDX4O14627 AC069236.1-201ENST00000604339 616 ntBASIC20.97■□□□□ 0.95
CDX4O14627 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CDX4O14627 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.97■□□□□ 0.95
CDX4O14627 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDX4O14627 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDX4O14627 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDX4O14627 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDX4O14627 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDX4O14627 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.96■□□□□ 0.95
CDX4O14627 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.96■□□□□ 0.95
CDX4O14627 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.96■□□□□ 0.95
CDX4O14627 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDX4O14627 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDX4O14627 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms