Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CGB1A6NKQ9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 SERBP1P1-201ENST00000396021 1160 ntBASIC17.2■□□□□ 0.34
CGB1A6NKQ9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.2■□□□□ 0.34
CGB1A6NKQ9 AC131281.2-201ENST00000520478 145 ntBASIC17.2■□□□□ 0.34
CGB1A6NKQ9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CGB1A6NKQ9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 AC092171.4-201ENST00000609130 632 ntBASIC17.19■□□□□ 0.34
CGB1A6NKQ9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CGB1A6NKQ9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 AL137060.1-201ENST00000618151 2648 ntBASIC17.18■□□□□ 0.34
CGB1A6NKQ9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CGB1A6NKQ9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 AC026310.3-201ENST00000625186 2373 ntBASIC17.17■□□□□ 0.34
CGB1A6NKQ9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CGB1A6NKQ9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 AC026471.6-201ENST00000622954 1905 ntBASIC17.16■□□□□ 0.34
CGB1A6NKQ9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 AC068587.7-201ENST00000641602 218 ntBASIC17.16■□□□□ 0.34
CGB1A6NKQ9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms