Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
SSC5DA1L4H1 AC068338.2-201ENST00000563278 1430 ntBASIC25.45■■□□□ 1.67
SSC5DA1L4H1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SSC5DA1L4H1 PRORSD1P-201ENST00000295112 541 ntBASIC25.45■■□□□ 1.66
SSC5DA1L4H1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.45■■□□□ 1.66
SSC5DA1L4H1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.45■■□□□ 1.66
SSC5DA1L4H1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SSC5DA1L4H1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
SSC5DA1L4H1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
SSC5DA1L4H1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.44■■□□□ 1.66
SSC5DA1L4H1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 RNA5SP413-201ENST00000516373 109 ntBASIC25.43■■□□□ 1.66
SSC5DA1L4H1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.43■■□□□ 1.66
SSC5DA1L4H1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 MIPEPP3-201ENST00000412105 444 ntBASIC25.42■■□□□ 1.66
SSC5DA1L4H1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 AC098590.1-201ENST00000468126 897 ntBASIC25.42■■□□□ 1.66
SSC5DA1L4H1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SSC5DA1L4H1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.41■■□□□ 1.66
SSC5DA1L4H1 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.41■■□□□ 1.66
SSC5DA1L4H1 AC093787.1-201ENST00000450396 207 ntBASIC25.41■■□□□ 1.66
SSC5DA1L4H1 AC007322.4-201ENST00000509611 723 ntBASIC25.41■■□□□ 1.66
SSC5DA1L4H1 SLC7A5P1-201ENST00000568957 537 ntBASIC25.41■■□□□ 1.66
SSC5DA1L4H1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.41■■□□□ 1.66
SSC5DA1L4H1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SSC5DA1L4H1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.41■■□□□ 1.66
SSC5DA1L4H1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.41■■□□□ 1.66
SSC5DA1L4H1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SSC5DA1L4H1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.4■■□□□ 1.66
SSC5DA1L4H1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
SSC5DA1L4H1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SSC5DA1L4H1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SSC5DA1L4H1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SSC5DA1L4H1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SSC5DA1L4H1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SSC5DA1L4H1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SSC5DA1L4H1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.39■■□□□ 1.66
SSC5DA1L4H1 EEF1DP3-203ENST00000566025 782 ntBASIC25.39■■□□□ 1.66
SSC5DA1L4H1 AC083880.1-201ENST00000608266 535 ntBASIC25.39■■□□□ 1.66
SSC5DA1L4H1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.39■■□□□ 1.66
SSC5DA1L4H1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.39■■□□□ 1.66
SSC5DA1L4H1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 MKRN4P-201ENST00000444706 1521 ntBASIC25.39■■□□□ 1.65
SSC5DA1L4H1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
SSC5DA1L4H1 RPS2P52-201ENST00000469610 820 ntBASIC25.39■■□□□ 1.65
SSC5DA1L4H1 MIR4758-201ENST00000577688 71 ntBASIC25.39■■□□□ 1.65
SSC5DA1L4H1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 RARRES2P4-201ENST00000514074 484 ntBASIC25.38■■□□□ 1.65
SSC5DA1L4H1 AC079089.2-201ENST00000531211 1277 ntBASIC25.38■■□□□ 1.65
SSC5DA1L4H1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SSC5DA1L4H1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 LINC01960-201ENST00000563759 1884 ntBASIC25.37■■□□□ 1.65
SSC5DA1L4H1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 TERF1P5-201ENST00000477545 1207 ntBASIC25.37■■□□□ 1.65
SSC5DA1L4H1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms