Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV25A0A0B4J276 AC068473.5-201ENST00000616428 2072 ntBASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV25A0A0B4J276 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 MIR5787-201ENST00000611784 55 ntBASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV25A0A0B4J276 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AC005224.4-201ENST00000583262 1652 ntBASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AC242852.2-201ENST00000615738 1807 ntBASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 C9orf163-202ENST00000624034 2573 ntBASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AC026271.2-201ENST00000428091 497 ntBASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AC034268.1-201ENST00000441047 882 ntBASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 TERF1P2-201ENST00000583350 1212 ntBASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV25A0A0B4J276 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV25A0A0B4J276 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV25A0A0B4J276 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms