Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 AC105233.4-201ENST00000642045 216 ntBASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV20A0A0B4J274 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 CCDC92B-201ENST00000575506 885 ntBASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 AC022517.1-201ENST00000592429 346 ntBASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV20A0A0B4J274 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 EP400NL-214ENST00000641289 2402 ntBASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV20A0A0B4J274 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 AC068587.7-201ENST00000641602 218 ntBASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV20A0A0B4J274 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 KRT18P14-201ENST00000534205 1250 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms