Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 AC092171.4-201ENST00000609130 632 ntBASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 AC131212.1-201ENST00000613771 668 ntBASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 AL136116.3-201ENST00000402907 1138 ntBASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV39A0A0B4J263 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRAV39A0A0B4J263 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.02■□□□□ 0.47
TRAV39A0A0B4J263 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV39A0A0B4J263 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV39A0A0B4J263 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV39A0A0B4J263 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV39A0A0B4J263 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 AC079089.2-201ENST00000531211 1277 ntBASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV39A0A0B4J263 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 AC026471.6-201ENST00000622954 1905 ntBASIC18■□□□□ 0.47
TRAV39A0A0B4J263 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 OR2I1P-207ENST00000453522 948 ntBASIC18■□□□□ 0.47
TRAV39A0A0B4J263 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV39A0A0B4J263 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV39A0A0B4J263 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms