Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.08■□□□□ 0.65
IGKV1D-43A0A0B4J1Z2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.08■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC133561.4-201ENST00000566112 224 ntBASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC008764.7-201ENST00000593779 1081 ntBASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AP001330.3-201ENST00000520123 633 ntBASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AL031432.3-201ENST00000607698 485 ntBASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC099791.1-201ENST00000416440 715 ntBASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC126544.1-201ENST00000580842 1059 ntBASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms