Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL157384.1-201ENST00000445995 2473 ntBASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-7A0A0A0MS04 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 GOLGA2P6-201ENST00000340929 2049 ntBASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC009299.2-201ENST00000482477 511 ntBASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-7A0A0A0MS04 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 MIR6724-1-201ENST00000616420 92 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 MIR6724-2-201ENST00000616483 92 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 MIR6724-4-201ENST00000617390 92 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 MIR6724-3-201ENST00000622482 92 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 AL117332.1-201ENST00000622628 974 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC241377.3-202ENST00000626088 1088 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC241585.3-202ENST00000628937 1088 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC245100.8-202ENST00000629247 1058 ntBASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRBV6-7A0A0A0MS04 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 PKD1P6-201ENST00000343738 4769 ntBASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV6-7A0A0A0MS04 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV6-7A0A0A0MS04 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms