Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SMS-202ENST00000404933 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 POC5-213ENST00000514838 1984 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 SMIM15-201ENST00000339020 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 OR6F1-201ENST00000302084 1061 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SLC1A1P43005 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SLC1A1P43005 SERHL2-202ENST00000335879 753 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 GNAS-209ENST00000371081 730 ntTSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 RN7SKP212-201ENST00000410851 328 ntBASIC12.58□□□□□ -0.4
SLC1A1P43005 ARHGEF19-AS1-201ENST00000457809 439 ntTSL 3 BASIC12.58□□□□□ -0.4
SLC1A1P43005 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 OR7E26P-201ENST00000502808 1006 ntBASIC12.58□□□□□ -0.4
SLC1A1P43005 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 AP003063.1-202ENST00000529238 520 ntTSL 3 BASIC12.58□□□□□ -0.4
SLC1A1P43005 BOLA3-AS1-203ENST00000533563 1599 ntTSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 C12orf80-202ENST00000551894 1257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 CD300LF-210ENST00000583937 1275 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 EIF5AP2-201ENST00000585668 1047 ntBASIC12.58□□□□□ -0.4
SLC1A1P43005 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC12.58□□□□□ -0.4
SLC1A1P43005 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC12.58□□□□□ -0.4
SLC1A1P43005 ZNF2-203ENST00000614034 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 BX510359.6-201ENST00000615765 343 ntBASIC12.58□□□□□ -0.4
SLC1A1P43005 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 AC138430.2-201ENST00000624068 504 ntBASIC12.58□□□□□ -0.4
SLC1A1P43005 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 TNFRSF9-201ENST00000377507 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 AL512770.1-202ENST00000421657 1914 ntTSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 NR2C2-203ENST00000406272 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SLC1A1P43005 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC12.58□□□□□ -0.4
SLC1A1P43005 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC12.58□□□□□ -0.4
SLC1A1P43005 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SLC1A1P43005 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 CD44-209ENST00000433892 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 COG6-204ENST00000455146 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SLC1A1P43005 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 AC239801.1-201ENST00000458399 1398 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SLC1A1P43005 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SLC1A1P43005 GPRASP2-205ENST00000543253 3935 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
SLC1A1P43005 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC12.57□□□□□ -0.4
SLC1A1P43005 DAB1-205ENST00000371236 5298 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SLC1A1P43005 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 FP885919.1-201ENST00000331259 1038 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 PGAM1P7-201ENST00000413837 737 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 AC004980.2-201ENST00000423648 497 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 AC116347.1-201ENST00000442824 720 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC12.57□□□□□ -0.4
SLC1A1P43005 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 Z84723.1-201ENST00000568710 773 ntTSL 3 BASIC12.57□□□□□ -0.4
SLC1A1P43005 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SLC1A1P43005 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC12.57□□□□□ -0.4
SLC1A1P43005 RN7SL121P-201ENST00000584223 273 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC12.57□□□□□ -0.4
SLC1A1P43005 Metazoa_SRP.49-201ENST00000616811 283 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC12.57□□□□□ -0.4
SLC1A1P43005 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 PSG3-201ENST00000327495 1961 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 SRRM5-202ENST00000607544 2698 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 LIMK1-202ENST00000418310 3360 ntTSL 5 BASIC12.57□□□□□ -0.4
SLC1A1P43005 MS4A15-202ENST00000405633 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 SPIDR-203ENST00000517693 1848 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 NT5C3AP1-202ENST00000441170 1663 ntBASIC12.57□□□□□ -0.4
SLC1A1P43005 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 CEP89-204ENST00000590597 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 ZNF155-202ENST00000407951 2222 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SLC1A1P43005 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC12.57□□□□□ -0.4
SLC1A1P43005 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms