Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMEM263-209ENST00000551813 1483 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 PRR5L-216ENST00000530639 2291 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 PDE4C-210ENST00000597297 1559 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 PLA2G4C-201ENST00000354276 2496 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 NR1I2-201ENST00000337940 2743 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 SPIDR-203ENST00000517693 1848 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 ARMC2-203ENST00000392644 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 C11orf54-215ENST00000617482 2417 ntTSL 3 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 UROS-201ENST00000368774 744 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL645998.1-201ENST00000424552 345 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AC006987.2-201ENST00000434709 527 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 KLF7-209ENST00000458272 539 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL157413.1-201ENST00000458461 823 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 SYNPR-205ENST00000465156 829 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 RN7SL704P-201ENST00000478699 274 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 NEMF-210ENST00000556672 590 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 FP700107.1-201ENST00000615237 1178 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 MIR6753-201ENST00000617169 164 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL121832.1-204ENST00000622414 548 ntTSL 3 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AP003062.2-201ENST00000624288 1117 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AC130469.2-201ENST00000625112 1092 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AL356585.3-201ENST00000625196 1017 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 TRIM51CP-201ENST00000505076 1357 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 RCL1-208ENST00000448872 1459 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 GYG1-210ENST00000484197 1563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 LINC01016-201ENST00000506222 3151 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 ARFGAP3-203ENST00000437119 1650 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 LINC01480-204ENST00000597199 1718 ntBASIC12.76□□□□□ -0.37
LMO3Q8TAP4 HHAT-208ENST00000545154 3507 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 FERMT2-205ENST00000553373 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO3Q8TAP4 AKNAD1-202ENST00000369995 2641 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 RGL4-201ENST00000290691 2885 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SLC18A1-202ENST00000276373 2753 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AP4S1-203ENST00000334725 1122 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 NKAPL-201ENST00000343684 1639 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 ATP1A1-AS1-201ENST00000369491 773 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PSIP1-205ENST00000397519 1664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 NEDD1-202ENST00000411739 2490 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 RPL10P4-201ENST00000412093 308 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AL954722.1-201ENST00000431238 259 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 HNRNPA1P30-202ENST00000440699 997 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AL138787.1-201ENST00000446354 1674 ntTSL 3 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 RHOQP2-201ENST00000449922 579 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC023157.1-201ENST00000453713 402 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 BTNL2-203ENST00000454136 1460 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC093772.1-202ENST00000504050 645 ntTSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PDLIM5-208ENST00000504489 538 ntTSL 4 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC005531.1-201ENST00000520729 1360 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 TUBA1A-207ENST00000550767 1384 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms