Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CALM3-206ENST00000594523 540 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 SMIM17-202ENST00000600547 573 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL138921.3-201ENST00000636357 992 ntBASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 LIMK1-202ENST00000418310 3360 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL645568.1-201ENST00000367716 1815 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 SPRYD3-201ENST00000301463 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 EIF3LP1-201ENST00000554099 1658 ntBASIC12.8□□□□□ -0.36
LMO3Q8TAP4 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 C14orf93-201ENST00000299088 3354 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 SLC16A7-216ENST00000552432 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RASGRP4-201ENST00000293062 2926 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RASGRP4-203ENST00000433821 2941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RASGRP4-215ENST00000614135 2942 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RASGRP4-218ENST00000617966 2927 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 ARMT1-204ENST00000545879 2495 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 NOXRED1-201ENST00000380835 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 TTTY5-201ENST00000400581 1562 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 CLDN17-201ENST00000286808 1193 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 HNRNPA1P6-201ENST00000394002 1117 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 PHKG1P4-201ENST00000430144 370 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SERBP1P4-201ENST00000446711 1162 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RBP5-202ENST00000542370 564 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SH3GL1P2-201ENST00000582245 1082 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AL365205.3-201ENST00000593368 169 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 pRNA.4-201ENST00000620973 89 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RN7SK-201ENST00000636484 328 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 TNFRSF9-201ENST00000377507 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 FAM69A-201ENST00000370310 2574 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 CD44-209ENST00000433892 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SLC14A1-204ENST00000436407 2264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 LILRB2-201ENST00000314446 2397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 PRKG2-202ENST00000395578 3431 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 AC015818.9-201ENST00000591705 4582 ntBASIC12.79□□□□□ -0.36
LMO3Q8TAP4 MAN1C1-202ENST00000374329 2461 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO3Q8TAP4 POTED-201ENST00000299443 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 SRRM5-202ENST00000607544 2698 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 FRG2DP-203ENST00000569028 1570 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms