Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RN7SL497P-201ENST00000476341 301 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 RN7SL307P-201ENST00000490342 295 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 MYADML-202ENST00000490394 797 ntTSL 3 BASIC12.68□□□□□ -0.38
MTHFRP42898 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 KBTBD11-OT1-201ENST00000518539 815 ntTSL 3 BASIC12.68□□□□□ -0.38
MTHFRP42898 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC12.68□□□□□ -0.38
MTHFRP42898 HNRNPA1P50-201ENST00000546565 928 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 NT5CP2-201ENST00000553305 561 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 AC026464.4-201ENST00000570054 1284 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 RN7SL491P-201ENST00000584748 269 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 AC010422.2-201ENST00000593554 635 ntTSL 3 BASIC12.68□□□□□ -0.38
MTHFRP42898 AC008735.4-201ENST00000614815 608 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 AC020917.3-201ENST00000621050 721 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 AC012186.3-201ENST00000623850 485 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 KIR2DL4-201ENST00000345540 1447 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 HSD3B1-204ENST00000528909 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MTHFRP42898 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.67□□□□□ -0.38
MTHFRP42898 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 CST8-201ENST00000246012 890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 SNAPC5-201ENST00000307979 794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 UGT3A1-202ENST00000333811 1114 ntTSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MTHFRP42898 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MTHFRP42898 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 AC073517.1-201ENST00000468165 541 ntTSL 4 BASIC12.67□□□□□ -0.38
MTHFRP42898 RN7SL342P-201ENST00000479616 294 ntBASIC12.67□□□□□ -0.38
MTHFRP42898 AC093871.1-201ENST00000503815 534 ntTSL 2 BASIC12.67□□□□□ -0.38
MTHFRP42898 AC010761.4-201ENST00000577325 521 ntTSL 3 BASIC12.67□□□□□ -0.38
MTHFRP42898 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 AC060764.1-201ENST00000603811 454 ntBASIC12.67□□□□□ -0.38
MTHFRP42898 AC008993.1-201ENST00000632280 776 ntBASIC12.67□□□□□ -0.38
MTHFRP42898 DHDDS-201ENST00000236342 1403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 LILRB4-202ENST00000391733 1742 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MTHFRP42898 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 NPSR1-209ENST00000531252 1377 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC12.67□□□□□ -0.38
MTHFRP42898 POM121L1P-202ENST00000605258 1835 ntBASIC12.67□□□□□ -0.38
MTHFRP42898 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MTHFRP42898 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
MTHFRP42898 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
MTHFRP42898 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.66□□□□□ -0.38
MTHFRP42898 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.66□□□□□ -0.38
MTHFRP42898 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MTHFRP42898 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.66□□□□□ -0.38
MTHFRP42898 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC12.66□□□□□ -0.38
MTHFRP42898 AC026992.2-203ENST00000563004 2419 ntBASIC12.66□□□□□ -0.38
MTHFRP42898 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.66□□□□□ -0.38
MTHFRP42898 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 NME1-201ENST00000013034 796 ntTSL 3 BASIC12.66□□□□□ -0.38
MTHFRP42898 IL36A-201ENST00000259211 888 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MTHFRP42898 PLP2-202ENST00000376327 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms