Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 CD99P1-205ENST00000527459 561 ntBASIC36.53■■■■□ 3.44
BIVM-ERCC5R4GMW8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC36.53■■■■□ 3.44
BIVM-ERCC5R4GMW8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC36.53■■■■□ 3.44
BIVM-ERCC5R4GMW8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 AP001160.3-201ENST00000601484 763 ntBASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC36.52■■■■□ 3.44
BIVM-ERCC5R4GMW8 ANOS2P-203ENST00000472227 1816 ntBASIC36.51■■■■□ 3.44
BIVM-ERCC5R4GMW8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
BIVM-ERCC5R4GMW8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
BIVM-ERCC5R4GMW8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC36.51■■■■□ 3.43
BIVM-ERCC5R4GMW8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
BIVM-ERCC5R4GMW8 KRT18P20-201ENST00000548986 1279 ntBASIC36.51■■■■□ 3.43
BIVM-ERCC5R4GMW8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
BIVM-ERCC5R4GMW8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC36.51■■■■□ 3.43
BIVM-ERCC5R4GMW8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
BIVM-ERCC5R4GMW8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
BIVM-ERCC5R4GMW8 AC010536.3-201ENST00000620306 533 ntBASIC36.5■■■■□ 3.43
BIVM-ERCC5R4GMW8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC36.5■■■■□ 3.43
BIVM-ERCC5R4GMW8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
BIVM-ERCC5R4GMW8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC36.49■■■■□ 3.43
BIVM-ERCC5R4GMW8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
BIVM-ERCC5R4GMW8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
BIVM-ERCC5R4GMW8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
BIVM-ERCC5R4GMW8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
BIVM-ERCC5R4GMW8 EEF1DP3-203ENST00000566025 782 ntBASIC36.48■■■■□ 3.43
BIVM-ERCC5R4GMW8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
BIVM-ERCC5R4GMW8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
BIVM-ERCC5R4GMW8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
BIVM-ERCC5R4GMW8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
BIVM-ERCC5R4GMW8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 AC083906.2-201ENST00000511578 360 ntBASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 AC079089.2-201ENST00000531211 1277 ntBASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
BIVM-ERCC5R4GMW8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
BIVM-ERCC5R4GMW8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC36.46■■■■□ 3.43
BIVM-ERCC5R4GMW8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC36.46■■■■□ 3.43
BIVM-ERCC5R4GMW8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
BIVM-ERCC5R4GMW8 AP006587.3-201ENST00000525742 1516 ntBASIC36.45■■■■□ 3.43
BIVM-ERCC5R4GMW8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
BIVM-ERCC5R4GMW8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC36.45■■■■□ 3.43
BIVM-ERCC5R4GMW8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
BIVM-ERCC5R4GMW8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC36.45■■■■□ 3.43
BIVM-ERCC5R4GMW8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC36.45■■■■□ 3.42
BIVM-ERCC5R4GMW8 AC133552.2-202ENST00000575694 574 ntBASIC36.45■■■■□ 3.42
BIVM-ERCC5R4GMW8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC36.45■■■■□ 3.42
BIVM-ERCC5R4GMW8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 SLC29A4P1-201ENST00000398760 971 ntBASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC36.44■■■■□ 3.42
BIVM-ERCC5R4GMW8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 AC007322.4-201ENST00000509611 723 ntBASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 MARS-234ENST00000630571 216 ntTSL 5 BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 MARS-235ENST00000630803 183 ntTSL 3 BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
BIVM-ERCC5R4GMW8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC36.42■■■■□ 3.42
BIVM-ERCC5R4GMW8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC36.42■■■■□ 3.42
BIVM-ERCC5R4GMW8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
BIVM-ERCC5R4GMW8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
BIVM-ERCC5R4GMW8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
BIVM-ERCC5R4GMW8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC36.41■■■■□ 3.42
BIVM-ERCC5R4GMW8 AC073210.2-201ENST00000430369 194 ntBASIC36.41■■■■□ 3.42
BIVM-ERCC5R4GMW8 AC013268.1-206ENST00000638368 961 ntBASIC36.41■■■■□ 3.42
BIVM-ERCC5R4GMW8 AC112229.1-201ENST00000639295 961 ntBASIC36.41■■■■□ 3.42
BIVM-ERCC5R4GMW8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 AL034346.1-201ENST00000568244 1277 ntBASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
BIVM-ERCC5R4GMW8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
BIVM-ERCC5R4GMW8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC36.39■■■■□ 3.42
BIVM-ERCC5R4GMW8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms