Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 ECEL1P1-201ENST00000373592 1742 ntBASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA6Q9UN73 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
PCDHA6Q9UN73 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 AC123595.1-201ENST00000440769 1046 ntBASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 MIR5787-201ENST00000611784 55 ntBASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHA6Q9UN73 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 OR7E47P-201ENST00000546390 1422 ntBASIC24.77■■□□□ 1.56
PCDHA6Q9UN73 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA6Q9UN73 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 EP400NL-214ENST00000641289 2402 ntBASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 BX005040.4-201ENST00000637145 1518 ntBASIC24.75■■□□□ 1.55
PCDHA6Q9UN73 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDHA6Q9UN73 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms