Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 AC009237.3-201ENST00000393279 1427 ntBASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
NLGN3Q9NZ94 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 AC006970.2-201ENST00000450065 779 ntBASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 AC011767.1-201ENST00000617410 1153 ntBASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 AC005224.4-201ENST00000583262 1652 ntBASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLGN3Q9NZ94 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLGN3Q9NZ94 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
NLGN3Q9NZ94 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NLGN3Q9NZ94 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
NLGN3Q9NZ94 KRT87P-202ENST00000534226 1464 ntBASIC21.14■□□□□ 0.98
NLGN3Q9NZ94 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
NLGN3Q9NZ94 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 CROCCP5-201ENST00000436658 830 ntBASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 AC104771.1-201ENST00000603335 964 ntBASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLGN3Q9NZ94 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 DUSP8P5-201ENST00000422884 1815 ntBASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 AC012676.1-201ENST00000574705 1949 ntBASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLGN3Q9NZ94 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.12■□□□□ 0.97
NLGN3Q9NZ94 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
NLGN3Q9NZ94 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms