Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 AC008406.3-201ENST00000620001 1374 ntBASIC19.5■□□□□ 0.71
HINT3Q9NQE9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HINT3Q9NQE9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HINT3Q9NQE9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HINT3Q9NQE9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 AL499627.2-201ENST00000606283 725 ntBASIC19.46■□□□□ 0.71
HINT3Q9NQE9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
HINT3Q9NQE9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HINT3Q9NQE9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 AC131281.2-201ENST00000520478 145 ntBASIC19.44■□□□□ 0.7
HINT3Q9NQE9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
HINT3Q9NQE9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HINT3Q9NQE9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HINT3Q9NQE9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms