Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 AC244015.2-201ENST00000616358 1861 ntBASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 AC092667.1-201ENST00000434301 2586 ntBASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SND1-IT1Q9HBX3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 KRT18P24-201ENST00000344739 1156 ntBASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 DUX4L18-201ENST00000553347 1267 ntBASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SND1-IT1Q9HBX3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SND1-IT1Q9HBX3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 BHLHE23-202ENST00000612929 1109 ntBASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.38□□□□□ -0.11
SND1-IT1Q9HBX3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms