Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 AC136469.2-201ENST00000623944 1028 ntBASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
SEC61A2Q9H9S3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 AC092053.2-201ENST00000640557 1818 ntBASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 AC139530.1-201ENST00000575312 1977 ntBASIC19.3■□□□□ 0.68
SEC61A2Q9H9S3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 AC019069.1-201ENST00000610008 1333 ntBASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 AP001330.3-201ENST00000520123 633 ntBASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 AF213884.3-201ENST00000563833 479 ntBASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 AC133561.4-201ENST00000566112 224 ntBASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A2Q9H9S3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 AC137767.1-201ENST00000602918 1920 ntBASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 SUDS3P1-201ENST00000505831 966 ntBASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 LINC00565-201ENST00000562710 2331 ntBASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SEC61A2Q9H9S3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 EDA-201ENST00000338901 1233 ntBASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 AC142381.2-201ENST00000566120 298 ntBASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A2Q9H9S3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms