Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GSX1Q9H4S2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 AL596275.1-201ENST00000423464 877 ntBASIC18.27■□□□□ 0.52
GSX1Q9H4S2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 AC007322.1-201ENST00000426983 750 ntBASIC18.27■□□□□ 0.52
GSX1Q9H4S2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 SMUG1P1-201ENST00000590640 811 ntBASIC18.27■□□□□ 0.52
GSX1Q9H4S2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GSX1Q9H4S2 MIR6089-201ENST00000616698 64 ntBASIC18.27■□□□□ 0.52
GSX1Q9H4S2 AC231657.2-201ENST00000624556 255 ntBASIC18.27■□□□□ 0.52
GSX1Q9H4S2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GSX1Q9H4S2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GSX1Q9H4S2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 RNA5SP413-201ENST00000516373 109 ntBASIC18.26■□□□□ 0.51
GSX1Q9H4S2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GSX1Q9H4S2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 BX005040.4-201ENST00000637145 1518 ntBASIC18.25■□□□□ 0.51
GSX1Q9H4S2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 AP006294.2-201ENST00000641667 209 ntBASIC18.25■□□□□ 0.51
GSX1Q9H4S2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 AC004812.2-201ENST00000611079 2094 ntBASIC18.25■□□□□ 0.51
GSX1Q9H4S2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.25■□□□□ 0.51
GSX1Q9H4S2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 DUX4L16-201ENST00000555130 1264 ntBASIC18.24■□□□□ 0.51
GSX1Q9H4S2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GSX1Q9H4S2 HLA-L-211ENST00000482052 1765 ntBASIC18.24■□□□□ 0.51
GSX1Q9H4S2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 AC098590.1-201ENST00000468126 897 ntBASIC18.23■□□□□ 0.51
GSX1Q9H4S2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GSX1Q9H4S2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GSX1Q9H4S2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GSX1Q9H4S2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
GSX1Q9H4S2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GSX1Q9H4S2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms