Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHMP4BQ9H444 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
CHMP4BQ9H444 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CHMP4BQ9H444 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHMP4BQ9H444 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHMP4BQ9H444 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHMP4BQ9H444 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 AC096631.2-201ENST00000436136 790 ntBASIC27.22■■□□□ 1.95
CHMP4BQ9H444 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 AC106739.1-201ENST00000617035 715 ntBASIC27.22■■□□□ 1.95
CHMP4BQ9H444 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 GOLGA2P6-201ENST00000340929 2049 ntBASIC27.22■■□□□ 1.95
CHMP4BQ9H444 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHMP4BQ9H444 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 FAM99A-202ENST00000538190 1989 ntBASIC27.21■■□□□ 1.95
CHMP4BQ9H444 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHMP4BQ9H444 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.2■■□□□ 1.95
CHMP4BQ9H444 EDA-201ENST00000338901 1233 ntBASIC27.2■■□□□ 1.94
CHMP4BQ9H444 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHMP4BQ9H444 PBX2P1-201ENST00000493219 1291 ntBASIC27.2■■□□□ 1.94
CHMP4BQ9H444 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.2■■□□□ 1.94
CHMP4BQ9H444 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CHMP4BQ9H444 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 AC133561.4-201ENST00000566112 224 ntBASIC27.19■■□□□ 1.94
CHMP4BQ9H444 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms