Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR2J3Q9H1A7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 AC068587.7-201ENST00000641602 218 ntBASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 AC133637.1-201ENST00000624115 1537 ntBASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR2J3Q9H1A7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 AL356740.2-201ENST00000601559 647 ntBASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
POLR2J3Q9H1A7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
POLR2J3Q9H1A7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
POLR2J3Q9H1A7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
POLR2J3Q9H1A7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR2J3Q9H1A7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR2J3Q9H1A7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 AC079089.2-201ENST00000531211 1277 ntBASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 AC092171.4-201ENST00000609130 632 ntBASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 pRNA.6-201ENST00000610482 90 ntBASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 pRNA.5-201ENST00000612139 90 ntBASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 pRNA.11-201ENST00000618423 90 ntBASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 pRNA.13-201ENST00000619112 90 ntBASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR2J3Q9H1A7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 AC244015.2-201ENST00000616358 1861 ntBASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms