Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLPBQ9H078 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L2-201ENST00000561772 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 AL354811.1-201ENST00000610286 706 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L6-201ENST00000626483 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L1-201ENST00000627662 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L8-201ENST00000629013 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L3-201ENST00000630187 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L7-201ENST00000630678 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 DUX4L5-201ENST00000630834 1275 ntBASIC21.68■■□□□ 1.06
CLPBQ9H078 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.68■■□□□ 1.06
CLPBQ9H078 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.68■■□□□ 1.06
CLPBQ9H078 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.68■■□□□ 1.06
CLPBQ9H078 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLPBQ9H078 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.67■■□□□ 1.06
CLPBQ9H078 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CLPBQ9H078 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CLPBQ9H078 AC123595.1-201ENST00000440769 1046 ntBASIC21.67■■□□□ 1.06
CLPBQ9H078 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.67■■□□□ 1.06
CLPBQ9H078 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLPBQ9H078 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPBQ9H078 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPBQ9H078 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.66■■□□□ 1.06
CLPBQ9H078 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.66■■□□□ 1.06
CLPBQ9H078 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPBQ9H078 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPBQ9H078 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPBQ9H078 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLPBQ9H078 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 AC242852.2-201ENST00000615738 1807 ntBASIC21.65■■□□□ 1.06
CLPBQ9H078 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
CLPBQ9H078 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.65■■□□□ 1.06
CLPBQ9H078 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.65■■□□□ 1.06
CLPBQ9H078 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CLPBQ9H078 KRT18P5-201ENST00000436075 1291 ntBASIC21.65■■□□□ 1.06
CLPBQ9H078 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.65■■□□□ 1.06
CLPBQ9H078 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CLPBQ9H078 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLPBQ9H078 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.64■■□□□ 1.06
CLPBQ9H078 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
CLPBQ9H078 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.64■■□□□ 1.06
CLPBQ9H078 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
CLPBQ9H078 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.64■■□□□ 1.05
CLPBQ9H078 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.64■■□□□ 1.05
CLPBQ9H078 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.64■■□□□ 1.05
CLPBQ9H078 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CLPBQ9H078 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CLPBQ9H078 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLPBQ9H078 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.63■■□□□ 1.05
CLPBQ9H078 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 AC068587.7-201ENST00000641602 218 ntBASIC21.63■■□□□ 1.05
CLPBQ9H078 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.63■■□□□ 1.05
CLPBQ9H078 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.63■■□□□ 1.05
CLPBQ9H078 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CLPBQ9H078 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPBQ9H078 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 CCDC92B-201ENST00000575506 885 ntBASIC21.62■■□□□ 1.05
CLPBQ9H078 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms