Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 AC068587.7-201ENST00000641602 218 ntBASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBE2OQ9C0C9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 ESRRAP1-201ENST00000400596 1257 ntBASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE2OQ9C0C9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 MIR1224-201ENST00000408193 85 ntBASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 MIPEPP3-201ENST00000412105 444 ntBASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.9■■□□□ 1.42
UBE2OQ9C0C9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
UBE2OQ9C0C9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
UBE2OQ9C0C9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.89■■□□□ 1.42
UBE2OQ9C0C9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE2OQ9C0C9 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.89■■□□□ 1.41
UBE2OQ9C0C9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE2OQ9C0C9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
UBE2OQ9C0C9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE2OQ9C0C9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
UBE2OQ9C0C9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.88■■□□□ 1.41
UBE2OQ9C0C9 AC144652.1-201ENST00000609974 1624 ntBASIC23.88■■□□□ 1.41
UBE2OQ9C0C9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBE2OQ9C0C9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.88■■□□□ 1.41
UBE2OQ9C0C9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.87■■□□□ 1.41
UBE2OQ9C0C9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 AC010141.3-201ENST00000456659 717 ntBASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 AP001160.3-201ENST00000601484 763 ntBASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
UBE2OQ9C0C9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 MKRN4P-201ENST00000444706 1521 ntBASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 UNC93B4-201ENST00000505679 747 ntBASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE2OQ9C0C9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 AC006058.3-201ENST00000606217 1069 ntBASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 AC092118.2-201ENST00000613495 667 ntBASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE2OQ9C0C9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 AC010536.3-201ENST00000620306 533 ntBASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE2OQ9C0C9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
UBE2OQ9C0C9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms