Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.59■□□□□ 0.89
BARD1Q99728 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
BARD1Q99728 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
BARD1Q99728 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BARD1Q99728 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.59■□□□□ 0.89
BARD1Q99728 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.59■□□□□ 0.89
BARD1Q99728 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BARD1Q99728 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.59■□□□□ 0.89
BARD1Q99728 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BARD1Q99728 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BARD1Q99728 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
BARD1Q99728 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BARD1Q99728 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BARD1Q99728 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
BARD1Q99728 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BARD1Q99728 AC092053.2-201ENST00000640557 1818 ntBASIC20.58■□□□□ 0.89
BARD1Q99728 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BARD1Q99728 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.58■□□□□ 0.89
BARD1Q99728 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.58■□□□□ 0.89
BARD1Q99728 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.58■□□□□ 0.89
BARD1Q99728 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.58■□□□□ 0.89
BARD1Q99728 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
BARD1Q99728 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.58■□□□□ 0.89
BARD1Q99728 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BARD1Q99728 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.58■□□□□ 0.88
BARD1Q99728 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BARD1Q99728 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BARD1Q99728 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BARD1Q99728 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.57■□□□□ 0.88
BARD1Q99728 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BARD1Q99728 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
BARD1Q99728 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BARD1Q99728 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BARD1Q99728 AC006455.2-201ENST00000429931 906 ntBASIC20.57■□□□□ 0.88
BARD1Q99728 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BARD1Q99728 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.57■□□□□ 0.88
BARD1Q99728 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.57■□□□□ 0.88
BARD1Q99728 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BARD1Q99728 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BARD1Q99728 FBXW4P1-201ENST00000426721 2239 ntBASIC20.56■□□□□ 0.88
BARD1Q99728 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BARD1Q99728 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.56■□□□□ 0.88
BARD1Q99728 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BARD1Q99728 AC034268.1-201ENST00000441047 882 ntBASIC20.56■□□□□ 0.88
BARD1Q99728 RARRES2P11-201ENST00000635158 484 ntBASIC20.56■□□□□ 0.88
BARD1Q99728 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
BARD1Q99728 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BARD1Q99728 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BARD1Q99728 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
BARD1Q99728 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BARD1Q99728 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.55■□□□□ 0.88
BARD1Q99728 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.55■□□□□ 0.88
BARD1Q99728 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.55■□□□□ 0.88
BARD1Q99728 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BARD1Q99728 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BARD1Q99728 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
BARD1Q99728 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.55■□□□□ 0.88
BARD1Q99728 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BARD1Q99728 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.54■□□□□ 0.88
BARD1Q99728 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BARD1Q99728 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.54■□□□□ 0.88
BARD1Q99728 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BARD1Q99728 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BARD1Q99728 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.54■□□□□ 0.88
BARD1Q99728 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.54■□□□□ 0.88
BARD1Q99728 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BARD1Q99728 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.54■□□□□ 0.88
BARD1Q99728 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BARD1Q99728 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.54■□□□□ 0.88
BARD1Q99728 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BARD1Q99728 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BARD1Q99728 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
BARD1Q99728 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
BARD1Q99728 AC087742.1-201ENST00000575880 1738 ntBASIC20.53■□□□□ 0.88
BARD1Q99728 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BARD1Q99728 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BARD1Q99728 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.53■□□□□ 0.88
BARD1Q99728 AC022517.1-201ENST00000592429 346 ntBASIC20.53■□□□□ 0.88
BARD1Q99728 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BARD1Q99728 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.53■□□□□ 0.88
BARD1Q99728 AC009086.3-201ENST00000623486 1008 ntBASIC20.53■□□□□ 0.88
BARD1Q99728 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BARD1Q99728 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BARD1Q99728 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BARD1Q99728 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms