Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.79■□□□□ 0.44
S1PR3Q99500 DUX4L19-201ENST00000557448 1267 ntBASIC17.79■□□□□ 0.44
S1PR3Q99500 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
S1PR3Q99500 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
S1PR3Q99500 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
S1PR3Q99500 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
S1PR3Q99500 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.79■□□□□ 0.44
S1PR3Q99500 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
S1PR3Q99500 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.78■□□□□ 0.44
S1PR3Q99500 MIR3181-201ENST00000578512 73 ntBASIC17.78■□□□□ 0.44
S1PR3Q99500 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.78■□□□□ 0.44
S1PR3Q99500 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.78■□□□□ 0.44
S1PR3Q99500 AC068587.7-201ENST00000641602 218 ntBASIC17.78■□□□□ 0.44
S1PR3Q99500 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
S1PR3Q99500 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
S1PR3Q99500 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
S1PR3Q99500 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
S1PR3Q99500 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
S1PR3Q99500 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.77■□□□□ 0.44
S1PR3Q99500 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
S1PR3Q99500 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
S1PR3Q99500 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.77■□□□□ 0.44
S1PR3Q99500 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
S1PR3Q99500 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.77■□□□□ 0.44
S1PR3Q99500 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
S1PR3Q99500 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
S1PR3Q99500 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
S1PR3Q99500 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
S1PR3Q99500 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
S1PR3Q99500 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
S1PR3Q99500 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.76■□□□□ 0.43
S1PR3Q99500 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.76■□□□□ 0.43
S1PR3Q99500 AC087239.1-201ENST00000622671 572 ntBASIC17.76■□□□□ 0.43
S1PR3Q99500 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
S1PR3Q99500 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
S1PR3Q99500 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
S1PR3Q99500 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 SYT6-210ENST00000641643 1587 ntBASIC17.75■□□□□ 0.43
S1PR3Q99500 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 AL138724.1-201ENST00000606771 1088 ntBASIC17.75■□□□□ 0.43
S1PR3Q99500 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
S1PR3Q99500 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
S1PR3Q99500 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.75■□□□□ 0.43
S1PR3Q99500 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
S1PR3Q99500 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
S1PR3Q99500 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
S1PR3Q99500 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
S1PR3Q99500 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
S1PR3Q99500 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.74■□□□□ 0.43
S1PR3Q99500 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
S1PR3Q99500 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.74■□□□□ 0.43
S1PR3Q99500 FBXW4P1-201ENST00000426721 2239 ntBASIC17.74■□□□□ 0.43
S1PR3Q99500 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
S1PR3Q99500 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
S1PR3Q99500 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
S1PR3Q99500 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.74■□□□□ 0.43
S1PR3Q99500 AL031602.1-201ENST00000633169 911 ntBASIC17.74■□□□□ 0.43
S1PR3Q99500 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.74■□□□□ 0.43
S1PR3Q99500 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
S1PR3Q99500 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.74■□□□□ 0.43
S1PR3Q99500 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
S1PR3Q99500 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
S1PR3Q99500 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
S1PR3Q99500 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
S1PR3Q99500 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.73■□□□□ 0.43
S1PR3Q99500 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.73■□□□□ 0.43
S1PR3Q99500 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
S1PR3Q99500 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
S1PR3Q99500 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
S1PR3Q99500 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.73■□□□□ 0.43
S1PR3Q99500 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
S1PR3Q99500 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.73■□□□□ 0.43
S1PR3Q99500 OR2I1P-207ENST00000453522 948 ntBASIC17.73■□□□□ 0.43
S1PR3Q99500 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.73■□□□□ 0.43
S1PR3Q99500 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.73■□□□□ 0.43
S1PR3Q99500 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.73■□□□□ 0.43
S1PR3Q99500 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.73■□□□□ 0.43
S1PR3Q99500 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms