Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NEK1Q96PY6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.64■■□□□ 1.69
NEK1Q96PY6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
NEK1Q96PY6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
NEK1Q96PY6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NEK1Q96PY6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NEK1Q96PY6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
NEK1Q96PY6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NEK1Q96PY6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 AC008764.7-201ENST00000593779 1081 ntBASIC25.63■■□□□ 1.69
NEK1Q96PY6 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.63■■□□□ 1.69
NEK1Q96PY6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NEK1Q96PY6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NEK1Q96PY6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 EDA-201ENST00000338901 1233 ntBASIC25.62■■□□□ 1.69
NEK1Q96PY6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.62■■□□□ 1.69
NEK1Q96PY6 AC133561.4-201ENST00000566112 224 ntBASIC25.62■■□□□ 1.69
NEK1Q96PY6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.62■■□□□ 1.69
NEK1Q96PY6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.62■■□□□ 1.69
NEK1Q96PY6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.62■■□□□ 1.69
NEK1Q96PY6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NEK1Q96PY6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.62■■□□□ 1.69
NEK1Q96PY6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NEK1Q96PY6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
NEK1Q96PY6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.61■■□□□ 1.69
NEK1Q96PY6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.61■■□□□ 1.69
NEK1Q96PY6 AC126544.1-201ENST00000580842 1059 ntBASIC25.61■■□□□ 1.69
NEK1Q96PY6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
NEK1Q96PY6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.61■■□□□ 1.69
NEK1Q96PY6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NEK1Q96PY6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.6■■□□□ 1.69
NEK1Q96PY6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.6■■□□□ 1.69
NEK1Q96PY6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.6■■□□□ 1.69
NEK1Q96PY6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 AP001330.3-201ENST00000520123 633 ntBASIC25.6■■□□□ 1.69
NEK1Q96PY6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
NEK1Q96PY6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NEK1Q96PY6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.6■■□□□ 1.69
NEK1Q96PY6 FAM99A-202ENST00000538190 1989 ntBASIC25.59■■□□□ 1.69
NEK1Q96PY6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NEK1Q96PY6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.59■■□□□ 1.69
NEK1Q96PY6 AC099791.1-201ENST00000416440 715 ntBASIC25.59■■□□□ 1.69
NEK1Q96PY6 AL139246.5-201ENST00000606645 996 ntBASIC25.59■■□□□ 1.69
NEK1Q96PY6 AL031432.3-201ENST00000607698 485 ntBASIC25.59■■□□□ 1.69
NEK1Q96PY6 AL355001.2-201ENST00000620617 1191 ntBASIC25.59■■□□□ 1.69
NEK1Q96PY6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NEK1Q96PY6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NEK1Q96PY6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NEK1Q96PY6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NEK1Q96PY6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NEK1Q96PY6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.58■■□□□ 1.69
NEK1Q96PY6 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.58■■□□□ 1.69
NEK1Q96PY6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
NEK1Q96PY6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NEK1Q96PY6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NEK1Q96PY6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
NEK1Q96PY6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NEK1Q96PY6 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.58■■□□□ 1.68
NEK1Q96PY6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.57■■□□□ 1.68
NEK1Q96PY6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.57■■□□□ 1.68
NEK1Q96PY6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.57■■□□□ 1.68
NEK1Q96PY6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.57■■□□□ 1.68
NEK1Q96PY6 AC027682.1-201ENST00000562846 899 ntBASIC25.57■■□□□ 1.68
NEK1Q96PY6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.57■■□□□ 1.68
NEK1Q96PY6 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.57■■□□□ 1.68
NEK1Q96PY6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NEK1Q96PY6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms