Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 AL139246.5-201ENST00000606645 996 ntBASIC20.37■□□□□ 0.85
COL21A1Q96P44 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 AL137060.1-201ENST00000618151 2648 ntBASIC20.37■□□□□ 0.85
COL21A1Q96P44 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL21A1Q96P44 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL21A1Q96P44 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.36■□□□□ 0.85
COL21A1Q96P44 AC106739.1-201ENST00000617035 715 ntBASIC20.36■□□□□ 0.85
COL21A1Q96P44 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COL21A1Q96P44 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL21A1Q96P44 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
COL21A1Q96P44 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.35■□□□□ 0.85
COL21A1Q96P44 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.35■□□□□ 0.85
COL21A1Q96P44 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.35■□□□□ 0.85
COL21A1Q96P44 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.35■□□□□ 0.85
COL21A1Q96P44 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.35■□□□□ 0.85
COL21A1Q96P44 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL21A1Q96P44 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.34■□□□□ 0.85
COL21A1Q96P44 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL21A1Q96P44 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.34■□□□□ 0.85
COL21A1Q96P44 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL21A1Q96P44 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
COL21A1Q96P44 MIR4767-201ENST00000582827 78 ntBASIC20.34■□□□□ 0.85
COL21A1Q96P44 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.34■□□□□ 0.85
COL21A1Q96P44 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
COL21A1Q96P44 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COL21A1Q96P44 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.33■□□□□ 0.85
COL21A1Q96P44 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL21A1Q96P44 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.33■□□□□ 0.85
COL21A1Q96P44 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
COL21A1Q96P44 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.33■□□□□ 0.84
COL21A1Q96P44 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL21A1Q96P44 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
COL21A1Q96P44 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COL21A1Q96P44 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
COL21A1Q96P44 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL21A1Q96P44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL21A1Q96P44 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL21A1Q96P44 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL21A1Q96P44 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.31■□□□□ 0.84
COL21A1Q96P44 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL21A1Q96P44 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL21A1Q96P44 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms