Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 MIR3621-201ENST00000580529 85 ntBASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 C17orf82-201ENST00000623772 1530 ntBASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RTN4IP1Q8WWV3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 SLC25A24-204ENST00000569674 2357 ntBASIC18.1■□□□□ 0.49
RTN4IP1Q8WWV3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 AC005229.4-201ENST00000610085 2198 ntBASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTN4IP1Q8WWV3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4IP1Q8WWV3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4IP1Q8WWV3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4IP1Q8WWV3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
RTN4IP1Q8WWV3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTN4IP1Q8WWV3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RTN4IP1Q8WWV3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTN4IP1Q8WWV3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 AC244015.2-201ENST00000616358 1861 ntBASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTN4IP1Q8WWV3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 DUX4L4-201ENST00000566884 1269 ntBASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4IP1Q8WWV3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms