Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.36■■□□□ 1.01
SKA2Q8WVK7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SKA2Q8WVK7 AC242852.2-201ENST00000615738 1807 ntBASIC21.36■■□□□ 1.01
SKA2Q8WVK7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SKA2Q8WVK7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SKA2Q8WVK7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 EP400NL-214ENST00000641289 2402 ntBASIC21.35■■□□□ 1.01
SKA2Q8WVK7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 AL355001.2-201ENST00000620617 1191 ntBASIC21.35■■□□□ 1.01
SKA2Q8WVK7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 AC137767.1-201ENST00000602918 1920 ntBASIC21.35■■□□□ 1.01
SKA2Q8WVK7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SKA2Q8WVK7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 AC099791.1-201ENST00000416440 715 ntBASIC21.34■■□□□ 1.01
SKA2Q8WVK7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 AC027682.1-201ENST00000562846 899 ntBASIC21.34■■□□□ 1.01
SKA2Q8WVK7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SKA2Q8WVK7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 AC010141.3-201ENST00000456659 717 ntBASIC21.33■■□□□ 1.01
SKA2Q8WVK7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 AF213884.3-201ENST00000563833 479 ntBASIC21.33■■□□□ 1.01
SKA2Q8WVK7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SKA2Q8WVK7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.33■■□□□ 1
SKA2Q8WVK7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SKA2Q8WVK7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SKA2Q8WVK7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SKA2Q8WVK7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SKA2Q8WVK7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.32■■□□□ 1
SKA2Q8WVK7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.32■■□□□ 1
SKA2Q8WVK7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.32■■□□□ 1
SKA2Q8WVK7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.32■■□□□ 1
SKA2Q8WVK7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.32■■□□□ 1
SKA2Q8WVK7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.32■■□□□ 1
SKA2Q8WVK7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SKA2Q8WVK7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.32■■□□□ 1
SKA2Q8WVK7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SKA2Q8WVK7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.32■■□□□ 1
SKA2Q8WVK7 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.32■■□□□ 1
SKA2Q8WVK7 AP001330.3-201ENST00000520123 633 ntBASIC21.32■■□□□ 1
SKA2Q8WVK7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.32■■□□□ 1
SKA2Q8WVK7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.32■■□□□ 1
SKA2Q8WVK7 CA15P2-201ENST00000611168 834 ntBASIC21.32■■□□□ 1
SKA2Q8WVK7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.32■■□□□ 1
SKA2Q8WVK7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SKA2Q8WVK7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SKA2Q8WVK7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SKA2Q8WVK7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SKA2Q8WVK7 AC139530.1-201ENST00000575312 1977 ntBASIC21.32■■□□□ 1
SKA2Q8WVK7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.32■■□□□ 1
SKA2Q8WVK7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.31■■□□□ 1
SKA2Q8WVK7 AP005435.1-201ENST00000529293 1178 ntBASIC21.31■■□□□ 1
SKA2Q8WVK7 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.31■■□□□ 1
SKA2Q8WVK7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SKA2Q8WVK7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
SKA2Q8WVK7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SKA2Q8WVK7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
SKA2Q8WVK7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SKA2Q8WVK7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SKA2Q8WVK7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.3■■□□□ 1
SKA2Q8WVK7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SKA2Q8WVK7 AC142381.2-201ENST00000566120 298 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms