Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 MIR4497-201ENST00000583208 89 ntBASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALMS1Q8TCU4 AC055733.4-201ENST00000638462 1354 ntBASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 EEF1DP3-203ENST00000566025 782 ntBASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 AC142381.4-202ENST00000563973 229 ntBASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 AP006294.2-201ENST00000641667 209 ntBASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALMS1Q8TCU4 ESRRAP1-201ENST00000400596 1257 ntBASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 AC026366.1-201ENST00000488803 879 ntBASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ALMS1Q8TCU4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 AC091874.3-201ENST00000512672 1195 ntBASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ALMS1Q8TCU4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 AC068587.7-201ENST00000641602 218 ntBASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 AL121749.1-202ENST00000609313 2153 ntBASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.76□□□□□ -0.05
ALMS1Q8TCU4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 AC016405.3-201ENST00000607710 860 ntBASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 BX276092.2-201ENST00000417668 665 ntBASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ALMS1Q8TCU4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 MIR1224-201ENST00000408193 85 ntBASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 UNC93B5-201ENST00000530315 699 ntBASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.74□□□□□ -0.05
ALMS1Q8TCU4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms