Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LINC01560Q8TB33 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC01560Q8TB33 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC01560Q8TB33 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01560Q8TB33 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01560Q8TB33 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 UBE2DNL-204ENST00000602536 740 ntBASIC18.78■□□□□ 0.6
LINC01560Q8TB33 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
LINC01560Q8TB33 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 DUSP8P5-201ENST00000422884 1815 ntBASIC18.77■□□□□ 0.6
LINC01560Q8TB33 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
LINC01560Q8TB33 LINC01960-201ENST00000563759 1884 ntBASIC18.77■□□□□ 0.6
LINC01560Q8TB33 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC01560Q8TB33 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC01560Q8TB33 AC092068.2-201ENST00000590491 1708 ntBASIC18.77■□□□□ 0.59
LINC01560Q8TB33 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 AC079089.2-201ENST00000531211 1277 ntBASIC18.76■□□□□ 0.59
LINC01560Q8TB33 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 AP001160.3-201ENST00000601484 763 ntBASIC18.76■□□□□ 0.59
LINC01560Q8TB33 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.76■□□□□ 0.59
LINC01560Q8TB33 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 DUX4L16-201ENST00000555130 1264 ntBASIC18.75■□□□□ 0.59
LINC01560Q8TB33 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
LINC01560Q8TB33 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AP004607.7-201ENST00000527152 1677 ntBASIC18.74■□□□□ 0.59
LINC01560Q8TB33 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AC007322.1-201ENST00000426983 750 ntBASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AC083906.2-201ENST00000511578 360 ntBASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AL121832.2-201ENST00000610979 668 ntBASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AL050303.2-201ENST00000619798 666 ntBASIC18.74■□□□□ 0.59
LINC01560Q8TB33 AC231657.2-201ENST00000624556 255 ntBASIC18.74■□□□□ 0.59
LINC01560Q8TB33 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01560Q8TB33 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 AC055733.4-201ENST00000638462 1354 ntBASIC18.73■□□□□ 0.59
LINC01560Q8TB33 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LINC01560Q8TB33 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms