Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PKD1P6-201ENST00000343738 4769 ntBASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 AC005837.3-201ENST00000612163 286 ntBASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.6■□□□□ 0.89
SRFBP1Q8NEF9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.59■□□□□ 0.89
SRFBP1Q8NEF9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 AL034346.1-201ENST00000568244 1277 ntBASIC20.58■□□□□ 0.89
SRFBP1Q8NEF9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRFBP1Q8NEF9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRFBP1Q8NEF9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.58■□□□□ 0.88
SRFBP1Q8NEF9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRFBP1Q8NEF9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 MIR638-201ENST00000385237 100 ntBASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRFBP1Q8NEF9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRFBP1Q8NEF9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms